RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA801875" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_kingdom 2

tax_superkingdom 1

  • Viruses · 14 ✖

tax_phylum 1

bioproject 1

  • PRJNA801875 · 14 ✖

analysis 1

  • blastn · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
801077 801077 PRJNA801875_P_NODE_701_length_512_cov_2.446541_g599_i0 PRJNA801875 701 512 2.446541 12.52628992 Newfield virus 1654354 Viruses Viruses 797 0   NTclustered gi|1417910521|gb|MH384302.1| 1654354 g599 i0 94.892 6.931640625 509 26 99 0 1 509 3499 2991 Newfield virus strain MARminus3606 putative RNA-dependent RNA polymerase and orf2 genes, complete cds blastn 3549 797 1 Viruses   Orthornavirae       Permutotetraviridae   Newfield virus
3351977 3351977 PRJNA801875_P_NODE_2423_length_223_cov_1.776596_g2320_i0 PRJNA801875 2423 223 1.776596 3.96180908 Newfield virus 1654354 Viruses Viruses 307 3.8300000000000005e-79   NTclustered gi|1417910521|gb|MH384302.1| 1654354 g2320 i0 91.818 4.93273542600897 220 18 99 0 4 223 443 662 Newfield virus strain MARminus3606 putative RNA-dependent RNA polymerase and orf2 genes, complete cds blastn 1100 307 1 Viruses   Orthornavirae       Permutotetraviridae   Newfield virus
4629504 4629504 PRJNA801875_P_NODE_3144_length_187_cov_1.342105_g3041_i0 PRJNA801875 3144 187 1.342105 2.50973635 Drosophila A virus 595895 Viruses Viruses 326 8.54e-85   NTclustered gi|822478144|gb|KP969948.1| 595895 g3041 i0 99.441 15.3155080213904 179 1 96 0 5 183 2484 2306 Drosophila A virus isolate XIB_DrosophilaA RNA-dependent RNA polymerase gene, complete cds; and capsid precursor, gene, partial cds blastn 2864 326 1 Viruses unclassified ssRNA positive-strand viruses             Drosophila A virus
4629528 4629528 PRJNA801875_P_NODE_584_length_570_cov_2.928972_g484_i0 PRJNA801875 584 570 2.928972 16.6951404 Caudoviricetes sp. 2832643 Viruses Viruses 62.1 9.34e-5   NTclustered gi|2059632675|tpg|BK028438.1| 2832643 g484 i0 92.857 0.375438596491228 42 3 7 0 334 375 42431 42472 MAG TPA_asm: Caudoviricetes sp. isolate ctawJ4, partial genome blastn 214 62.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
7179414 7179414 PRJNA801875_P_NODE_4146_length_161_cov_0.904762_g4043_i0 PRJNA801875 4146 161 0.904762 1.45666682 Drosophila A virus 595895 Viruses Viruses 281 1.57e-71   NTclustered gi|822478147|gb|KP969949.1| 595895 g4043 i0 98.742 23.8509316770186 159 1 98 1 4 161 2552 2710 Drosophila A virus isolate delta11_DrosophilaA RNA-dependent RNA polymerase and capsid precursor, genes, partial cds blastn 3840 281 1 Viruses unclassified ssRNA positive-strand viruses             Drosophila A virus
8454041 8454041 PRJNA801875_P_NODE_1167_length_373_cov_3.393491_g1064_i0 PRJNA801875 1167 373 3.393491 12.65772143 Newfield virus 1654354 Viruses Viruses 490 6.3499999999999985e-134   NTclustered gi|2463635389|gb|OP263084.1| 1654354 g1064 i0 90.566 4.97319034852547 371 34 99 1 4 373 3909 3539 Newfield virus isolate GBM386 putative RNA-dependent RNA polymerase gene, complete cds blastn 1855 490 1 Viruses   Orthornavirae       Permutotetraviridae   Newfield virus
13554718 13554718 PRJNA801875_P_NODE_711_length_510_cov_3.541053_g609_i0 PRJNA801875 711 510 3.541053 18.0593703 Newfield virus 1654354 Viruses Viruses 830 0   NTclustered gi|1417910521|gb|MH384302.1| 1654354 g609 i0 96.245 5.95294117647059 506 19 99 0 3 508 1829 2334 Newfield virus strain MARminus3606 putative RNA-dependent RNA polymerase and orf2 genes, complete cds blastn 3036 830 1 Viruses   Orthornavirae       Permutotetraviridae   Newfield virus
18652542 18652542 PRJNA801875_P_NODE_2715_length_205_cov_3.123529_g2612_i0 PRJNA801875 2715 205 3.123529 6.40323445 Caudoviricetes sp. 2832643 Viruses Viruses 315 2.0699999999999998e-81   NTclustered gi|2054434277|tpg|BK035998.1| 2832643 g2612 i0 95.455 406.063414634146 198 7 96 2 4 200 18378 18182 MAG TPA_asm: Caudoviricetes sp. isolate ctbaE6, partial genome blastn 83243 315 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
21203455 21203455 PRJNA801875_P_NODE_2917_length_196_cov_2.149068_g2814_i0 PRJNA801875 2917 196 2.149068 4.21217328 Newfield virus 1654354 Viruses Viruses 318 1.5099999999999995e-82   NTclustered gi|1417910521|gb|MH384302.1| 1654354 g2814 i0 96.373 4.9234693877551 193 7 98 0 1 193 1417 1225 Newfield virus strain MARminus3606 putative RNA-dependent RNA polymerase and orf2 genes, complete cds blastn 965 318 1 Viruses   Orthornavirae       Permutotetraviridae   Newfield virus
22478109 22478109 PRJNA801875_P_NODE_2518_length_216_cov_2.298343_g2415_i0 PRJNA801875 2518 216 2.298343 4.96442088 Drosophila A virus 595895 Viruses Viruses 364 2.16e-96   NTclustered gi|822478135|gb|KP969945.1| 595895 g2415 i0 97.248 29.2453703703704 218 1 99 1 1 213 3265 3048 Drosophila A virus isolate XID_DrosophilaA RNA-dependent RNA polymerase gene, complete cds; and capsid precursor, gene, partial cds blastn 6317 364 1 Viruses unclassified ssRNA positive-strand viruses             Drosophila A virus
22478145 22478145 PRJNA801875_P_NODE_838_length_458_cov_4.241135_g736_i0 PRJNA801875 838 458 4.241135 19.4243983 Newfield virus 1654354 Viruses Viruses 651 0   NTclustered gi|1417910537|gb|MH384307.1| 1654354 g736 i0 93.157 5.93668122270742 453 16 99 2 2 453 1269 831 Newfield virus strain MARplus10845 putative RNA-dependent RNA polymerase and orf2 genes, complete cds blastn 2719 651 1 Viruses   Orthornavirae       Permutotetraviridae   Newfield virus
25027576 25027576 PRJNA801875_P_NODE_1300_length_349_cov_4.082803_g1197_i0 PRJNA801875 1300 349 4.082803 14.24898247 Newfield virus 1654354 Viruses Viruses 507 5.85e-139   NTclustered gi|1417910537|gb|MH384307.1| 1654354 g1197 i0 93.064 6.86532951289398 346 24 99 0 1 346 1794 1449 Newfield virus strain MARplus10845 putative RNA-dependent RNA polymerase and orf2 genes, complete cds blastn 2396 507 1 Viruses   Orthornavirae       Permutotetraviridae   Newfield virus
25027617 25027617 PRJNA801875_P_NODE_4600_length_152_cov_3.376068_g4497_i0 PRJNA801875 4600 152 3.376068 5.13162336 Newfield virus 1654354 Viruses Viruses 226 6.919999999999997e-55   NTclustered gi|1417910521|gb|MH384302.1| 1654354 g4497 i0 93.96 4.90131578947368 149 9 98 0 1 149 844 696 Newfield virus strain MARminus3606 putative RNA-dependent RNA polymerase and orf2 genes, complete cds blastn 745 226 1 Viruses   Orthornavirae       Permutotetraviridae   Newfield virus
25027622 25027622 PRJNA801875_P_NODE_660_length_529_cov_2.244939_g558_i0 PRJNA801875 660 529 2.244939 11.87572731 Newfield virus 1654354 Viruses Viruses 891 0   NTclustered gi|1417910521|gb|MH384302.1| 1654354 g558 i0 97.159 6.98109640831758 528 13 99 2 4 529 2468 2995 Newfield virus strain MARminus3606 putative RNA-dependent RNA polymerase and orf2 genes, complete cds blastn 3693 891 1 Viruses   Orthornavirae       Permutotetraviridae   Newfield virus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;