RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA801875" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA801875 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7179407 7179407 PRJNA801875_P_NODE_3466_length_176_cov_1.914894_g3363_i0 PRJNA801875 3466 176 1.914894 3.37021344 Gilbertella persicaria 101096 Fungi Fungi 202 1.39e-47   NTclustered gi|2323722952|ref|XM_051576773.1| 101096 g3363 i0 87.791 26.8920454545455 172 21 98 0 1 172 513 342 Gilbertella persicaria succinate dehydrogenase flavoprotein subunit 1 (B0P05DRAFT_529612), mRNA blastn 4733 202 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Gilbertella Gilbertella persicaria
11425561 11425561 PRJNA801875_P_NODE_2989_length_193_cov_2.208861_g2886_i0 PRJNA801875 2989 193 2.208861 4.26310173 Mucorales 4827 Fungi Fungi 82.4 2.12e-11   NTclustered gi|1002923371|gb|KU561742.1| 90258 g2886 i0 97.872 25.4611398963731 47 1 24 0 147 193 146 192 Saksenaea vasiformis strain NRRL A-21462 28S ribosomal RNA gene, partial sequence blastn 4914 82.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Saksenaeaceae Saksenaea Saksenaea vasiformis
22478092 22478092 PRJNA801875_P_NODE_1718_length_287_cov_2.376984_g1615_i0 PRJNA801875 1718 287 2.376984 6.82194408 Gilbertella persicaria 101096 Fungi Fungi 193 1.5e-44   NTclustered gi|2323714755|ref|XM_051576095.1| 101096 g1615 i0 79.225 33.5505226480836 284 53 98 5 1 281 281 1 Gilbertella persicaria heat-shock protein 90 (B0P05DRAFT_523699), partial mRNA blastn 9629 193 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Gilbertella Gilbertella persicaria

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;