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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA801875" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA801875 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3351974 3351974 PRJNA801875_P_NODE_2023_length_254_cov_1.744292_g1920_i0 PRJNA801875 2023 254 1.744292 4.43050168 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 134 8.01e-27   NTclustered gi|290986409|ref|XM_002675871.1| 5762 g1920 i0 78.673 18.9448818897638 211 37 81 8 7 213 588 382 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_80121), mRNA blastn 4812 134 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
4629493 4629493 PRJNA801875_P_NODE_2044_length_252_cov_1.447005_g1941_i0 PRJNA801875 2044 252 1.447005 3.6464526 Vahlkampfia sp. 1874882 Heterolobosea other_Eukaryota 193 1.29e-44   NTclustered gi|2651357786|gb|PP174301.1| 1874882 g1941 i0 93.75 48.6428571428571 128 8 51 0 56 183 3979 3852 Vahlkampfia sp. isolate 24M small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12258 193 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia sp.
5904557 5904557 PRJNA801875_P_NODE_1905_length_268_cov_1.690987_g1802_i0 PRJNA801875 1905 268 1.690987 4.53184516 Vahlkampfia sp. 1874882 Heterolobosea other_Eukaryota 187 6.449999999999998e-43   NTclustered gi|2651357786|gb|PP174301.1| 1874882 g1802 i0 81.028 1.11940298507463 253 32 92 13 1 247 3583 3341 Vahlkampfia sp. isolate 24M small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 300 187 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia sp.
7179420 7179420 PRJNA801875_P_NODE_506_length_616_cov_3.788296_g406_i0 PRJNA801875 506 616 3.788296 23.33590336 Heterolobosea sp. 1892890 Heterolobosea other_Eukaryota 1022 0   NTclustered gi|1059971677|gb|KT892699.1| 1892890 g406 i0 96.748 64.6834415584416 615 17 99 3 1 614 1856 1244 Heterolobosea sp. strain LPG3 18S ribosomal RNA gene, partial sequence blastn 39845 1022 1 Eukaryota Discoba   Heterolobosea         Heterolobosea sp.
13975649 13975649 PRJNA801875_P_NODE_1751_length_283_cov_2.209677_g1648_i0 PRJNA801875 1751 283 2.209677 6.25338591 Naegleria 5761 Heterolobosea other_Eukaryota 496 1e-135   NTclustered gi|2618963742|gb|OR769034.1| 5762 g1648 i0 98.571 11.8727915194346 280 4 99 0 1 280 4377 4098 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 3360 501 0.99001996007984 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
15249861 15249861 PRJNA801875_P_NODE_3012_length_193_cov_0.911392_g2909_i0 PRJNA801875 3012 193 0.911392 1.75898656 Naegleria 5761 Heterolobosea other_Eukaryota 335 1.48e-87   NTclustered gi|2618963742|gb|OR769034.1| 5762 g2909 i0 98.429 98.4766839378238 191 1 98 1 3 191 1368 1558 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 19006 335 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
16103605 16103605 PRJNA801875_P_NODE_3433_length_177_cov_2.774648_g3330_i0 PRJNA801875 3433 177 2.774648 4.91112696 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 296 6.26e-76   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g3330 i0 97.143 13.135593220339 175 5 99 0 3 177 2095 2269 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 2325 296 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
16524579 16524579 PRJNA801875_P_NODE_4153_length_160_cov_3.040000_g4050_i0 PRJNA801875 4153 160 3.04 4.864 Vahlkampfia 5770 Heterolobosea other_Eukaryota 285 1.2e-72   NTclustered gi|1860218302|gb|MT648420.1| 74082 g4050 i0 99.363 21.1125 157 1 98 0 1 157 166 10 Vahlkampfia avara isolate NP10 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 3378 285 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia avara
17379486 17379486 PRJNA801875_P_NODE_494_length_624_cov_4.826825_g394_i0 PRJNA801875 494 624 4.826825 30.119388 Heterolobosea sp. 1892890 Heterolobosea other_Eukaryota 846 0   NTclustered gi|1059971677|gb|KT892699.1| 1892890 g394 i0 93.092 23.338141025641 579 39 93 1 4 582 578 1 Heterolobosea sp. strain LPG3 18S ribosomal RNA gene, partial sequence blastn 14563 846 1 Eukaryota Discoba   Heterolobosea         Heterolobosea sp.
18652576 18652576 PRJNA801875_P_NODE_855_length_451_cov_7.778846_g753_i0 PRJNA801875 855 451 7.778846 35.08259546 Heterolobosea sp. 1892890 Heterolobosea other_Eukaryota 433 1.3399999999999995e-116   NTclustered gi|1059971677|gb|KT892699.1| 1892890 g753 i0 91.772 35.8425720620843 316 18 70 4 4 318 1130 822 Heterolobosea sp. strain LPG3 18S ribosomal RNA gene, partial sequence blastn 16165 433 1 Eukaryota Discoba   Heterolobosea         Heterolobosea sp.
20348109 20348109 PRJNA801875_P_NODE_2896_length_197_cov_1.456790_g2793_i0 PRJNA801875 2896 197 1.45679 2.8698763 Naegleria 5761 Heterolobosea other_Eukaryota 342 9.039999999999999e-90   NTclustered gi|2618963742|gb|OR769034.1| 5762 g2793 i0 98.462 14.7258883248731 195 2 98 1 1 194 3527 3333 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 2901 342 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;