RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA801875" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA801875 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
801043 801043 PRJNA801875_P_NODE_1221_length_363_cov_551.478659_g1118_i0 PRJNA801875 1221 363 551.478659 2001.86753217 Korotnevella jeppesenii 1678066 Discosea other_Eukaryota 468 2.88e-127   NTclustered gi|861553739|gb|KP719185.1| 1678066 g1118 i0 90.191 101.104683195592 367 25 99 9 1 361 1056 1417 Korotnevella jeppesenii strain A1JEPDK small subunit ribosomal RNA gene, partial sequence blastn 36701 468 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Korotnevella Korotnevella jeppesenii
4629488 4629488 PRJNA801875_P_NODE_1564_length_305_cov_8.381481_g1461_i0 PRJNA801875 1564 305 8.381481 25.56351705 Paramoeba perurans 437603 Discosea other_Eukaryota 377 4.13e-100   NTclustered gi|145386786|gb|EF216911.1| 437603 g1461 i0 89.667 91.6196721311475 300 25 98 4 4 303 1167 1460 Neoparamoeba perurans strain GD-HAC/2/2 28S large subunit ribosomal RNA gene, partial sequence blastn 27944 377 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba perurans
9729166 9729166 PRJNA801875_P_NODE_3648_length_172_cov_0.854015_g3545_i0 PRJNA801875 3648 172 0.854015 1.4689058 Vannella septentrionalis 197531 Discosea other_Eukaryota 268 1.32e-67   NTclustered gi|300078499|gb|GU001161.1| 197531 g3545 i0 95.783 2.22093023255814 166 7 97 0 3 168 907 1072 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 382 268 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
11004974 11004974 PRJNA801875_P_NODE_1889_length_269_cov_3.696581_g1786_i0 PRJNA801875 1889 269 3.696581 9.94380289 Paravannella minima 1443144 Discosea other_Eukaryota 468 2.06e-127   NTclustered gi|571331048|gb|KF895375.1| 1443144 g1786 i0 98.491 36.0520446096654 265 4 99 0 4 268 725 989 Paravannella minima strain CCAP 1533/1 18S ribosomal RNA gene, partial sequence blastn 9698 468 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
13975674 13975674 PRJNA801875_P_NODE_491_length_627_cov_2.251689_g391_i0 PRJNA801875 491 627 2.251689 14.11809003 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 734 0   NTclustered gi|33946348|gb|AY294153.1| 197527 g391 i0 88.045 99.4673046251994 619 74 99 0 9 627 954 336 Platyamoeba placida actin mRNA, partial cds blastn 62366 734 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
16103626 16103626 PRJNA801875_P_NODE_753_length_490_cov_3.002198_g651_i0 PRJNA801875 753 490 3.002198 14.7107702 Cochliopodium arabianum 1676989 Discosea other_Eukaryota 315 5.52e-81   NTclustered gi|667063467|gb|KJ781461.1| 1676989 g651 i0 79.079 94 478 85 97 5 1 475 155 620 Cochliopodium arabianum clone YT220 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial blastn 46060 315 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium arabianum
20348132 20348132 PRJNA801875_P_NODE_956_length_425_cov_886.702564_g853_i0 PRJNA801875 956 425 886.702564 3768.485897 Vannella 95228 Discosea other_Eukaryota 669 0   NTclustered gi|399764213|gb|JQ271724.1| 1215628 g853 i0 96.543 95.7035294117647 405 13 95 1 19 422 1496 1900 Vannella sp. ACN1 18S ribosomal RNA gene, partial sequence blastn 40674 671 0.997019374068554 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. ACN1
25027609 25027609 PRJNA801875_P_NODE_3800_length_168_cov_1.406015_g3697_i0 PRJNA801875 3800 168 1.406015 2.3621052 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 250 4.66e-62   NTclustered gi|330902855|gb|JF298253.1| 1017091 g3697 i0 93.976 6.40476190476191 166 8 98 2 3 166 1270 1105 Cochliopodium larifeili clone 901 18S ribosomal RNA gene, partial sequence blastn 1076 250 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;