RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA800090" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA800090 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13974420 13974420 PRJNA800090_P_NODE_167991_length_239_cov_2.082353_g165806_i0 PRJNA800090 167991 239 2.082353 4.97682367 Demospongiae 6042 Porifera other_Eukaryota 171 5.68e-38   NTclustered gi|512765214|gb|KC869452.1| 297730 g165806 i0 80.417 85.7866108786611 240 34 99 11 1 237 1148 1377 Verongula rigida voucher P46 28S ribosomal RNA gene, partial sequence blastn 20503 171 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Tethyida Hemiasterellidae Stelligera Stelligera rigida
22898229 22898229 PRJNA800090_P_NODE_184518_length_231_cov_0.901235_g182333_i0 PRJNA800090 184518 231 0.901235 2.08185285 Metazoa 33208 Porifera other_Eukaryota 60.2 1.23e-4   NTclustered gi|2732897007|ref|XM_065319865.1| 27933 g182333 i0 97.143 6.27272727272727 35 1 15 0 1 35 1280 1246 PREDICTED: Sycon ciliatum uncharacterized LOC135805773 (LOC135805773), transcript variant X2, mRNA blastn 1449 60.2 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;