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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA800090" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA800090 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
797505 797505 PRJNA800090_P_NODE_153001_length_253_cov_1.586957_g150816_i0 PRJNA800090 153001 253 1.586957 4.01500121 Platyamoeba placida 3454475 Discosea other_Eukaryota 307 4.44e-79   NTclustered gi|33946348|gb|AY294153.1| 197527 g150816 i0 89.069 98.3083003952569 247 27 98 0 4 250 579 333 Platyamoeba placida actin mRNA, partial cds blastn 24872 307 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
3347991 3347991 PRJNA800090_P_NODE_130123_length_277_cov_3.687500_g127938_i0 PRJNA800090 130123 277 3.6875 10.214375 Ripella tribonemae 2047823 Discosea other_Eukaryota 403 6.11e-108   NTclustered gi|1269228469|gb|MF683594.1| 2047823 g127938 i0 95.312 81.115523465704 256 9 92 3 1 254 928 674 Ripella tribonemae clone 22.1.12 18S ribosomal RNA gene, partial sequence blastn 22469 403 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella tribonemae
7176725 7176725 PRJNA800090_P_NODE_192686_length_228_cov_0.918239_g190501_i0 PRJNA800090 192686 228 0.918239 2.09358492 Mayorella sp. JJP-2003 242541 Discosea other_Eukaryota 326 1.08e-84   NTclustered gi|33946346|gb|AY294152.1| 242541 g190501 i0 92.544 79.5219298245614 228 15 100 2 1 228 11 236 Mayorella sp. JJP-2003 actin mRNA, partial cds blastn 18131 326 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Mayorella Mayorella sp. JJP-2003
7177547 7177547 PRJNA800090_P_NODE_50806_length_501_cov_2.796296_g48624_i0 PRJNA800090 50806 501 2.796296 14.00944296 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 344 7.209999999999998e-90   NTclustered gi|470380222|ref|XM_004333620.1| 1257118 g48624 i0 80.866 74.6646706586826 439 82 87 2 2 439 449 12 Acanthamoeba castellanii str. Neff ran, putative (ACA1_260190), partial mRNA blastn 37407 344 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8450947 8450947 PRJNA800090_P_NODE_169787_length_238_cov_1.189349_g167602_i0 PRJNA800090 169787 238 1.189349 2.83065062 Cochliopodium minus 313997 Discosea other_Eukaryota 337 5.27e-88   NTclustered gi|330902862|gb|JF298257.1| 313997 g167602 i0 92.469 13.1344537815126 239 13 100 4 1 238 385 151 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 3126 337 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
8452781 8452781 PRJNA800090_P_NODE_76227_length_386_cov_1.381703_g74042_i0 PRJNA800090 76227 386 1.381703 5.33337358 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 292 1.99e-74   NTclustered gi|470442906|ref|XM_004339540.1| 1257118 g74042 i0 84.459 20.9974093264249 296 46 77 0 27 322 315 20 Acanthamoeba castellanii str. Neff 60S ribosomal protein, putative (ACA1_063390), partial mRNA blastn 8105 292 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10149534 10149534 PRJNA800090_P_NODE_56748_length_466_cov_3.879093_g54564_i0 PRJNA800090 56748 466 3.879093 18.07657338 Vannellidae 95227 Discosea other_Eukaryota 647 0   NTclustered gi|327391632|gb|HM363630.1| 1002217 g54564 i0 94.55 100.510729613734 422 18 90 3 1 418 56 476 Vannella sp. GERL14 small subunit ribosomal RNA gene, partial sequence blastn 46838 647 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. GERL14
11003532 11003532 PRJNA800090_P_NODE_70809_length_405_cov_1.437500_g68624_i0 PRJNA800090 70809 405 1.4375 5.821875 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 311 5.81e-80   NTclustered gi|470418521|ref|XM_004337050.1| 1257118 g68624 i0 82.825 74.1802469135802 361 49 89 7 11 369 359 10 Acanthamoeba castellanii str. Neff cyclophylin, putative (ACA1_215460), partial mRNA blastn 30043 311 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
16100045 16100045 PRJNA800090_P_NODE_153253_length_253_cov_1.554348_g151068_i0 PRJNA800090 153253 253 1.554348 3.93250044 Cochliopodium minus 313997 Discosea other_Eukaryota 374 4.31e-99   NTclustered gi|330902862|gb|JF298257.1| 313997 g151068 i0 93.103 73.3715415019763 261 9 100 4 1 253 2112 1853 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 18563 374 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
25025647 25025647 PRJNA800090_P_NODE_45480_length_538_cov_1.663113_g43308_i0 PRJNA800090 45480 538 1.663113 8.94754794 Paramoeba branchiphila 308475 Discosea other_Eukaryota 433 1.6199999999999995e-116   NTclustered gi|226347442|gb|FJ807261.1| 308475 g43308 i0 81.262 64.407063197026 539 97 99 4 1 537 629 93 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 34651 433 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
25447734 25447734 PRJNA800090_P_NODE_61360_length_443_cov_3.358289_g59176_i0 PRJNA800090 61360 443 3.358289 14.87722027 Ripella 1217112 Discosea other_Eukaryota 647 0   NTclustered gi|1269228431|gb|MF683556.1| 2047822 g59176 i0 94.976 94.4243792325056 418 12 94 6 27 443 1234 1643 Ripella decalvata clone 26.2.11 18S ribosomal RNA gene, partial sequence blastn 41830 647 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella decalvata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;