RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA800090" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA800090 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3349891 3349891 PRJNA800090_P_NODE_36223_length_622_cov_2.515371_g34082_i0 PRJNA800090 36223 622 2.515371 15.64560762 Polychytrium aggregatum 110093 Fungi Fungi 383 1.9299999999999995e-101   NTclustered gi|2432129870|ref|XM_053107267.1| 110093 g34082 i0 82.057 68.9421221864952 457 74 73 8 43 495 688 236 Polychytrium aggregatum ribosomal protein S7 domain-containing protein (BJ171DRAFT_4084), mRNA blastn 42882 383 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
9724795 9724795 PRJNA800090_P_NODE_118348_length_294_cov_1.928889_g116163_i0 PRJNA800090 118348 294 1.928889 5.67093366 Polychytrium aggregatum 110093 Fungi Fungi 268 2.49e-67   NTclustered gi|2432142886|ref|XM_053110559.1| 110093 g116163 i0 83.929 87.9183673469388 280 45 95 0 15 294 320 41 Polychytrium aggregatum 60S ribosomal protein L42 (BJ171DRAFT_500193), mRNA blastn 25848 268 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
18648480 18648480 PRJNA800090_P_NODE_129975_length_278_cov_1.047847_g127790_i0 PRJNA800090 129975 278 1.047847 2.91301466 Spizellomyces punctatus 109760 Fungi Fungi 198 3.1099999999999998e-46   NTclustered gi|1026993555|ref|XM_016753594.1| 645134 g127790 i0 80.377 4.94604316546763 265 48 95 4 15 277 646 384 Spizellomyces punctatus DAOM BR117 26S proteasome non-ATPase regulatory subunit 14 (SPPG_05378), mRNA blastn 1375 198 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
23749931 23749931 PRJNA800090_P_NODE_141199_length_265_cov_1.448980_g139014_i0 PRJNA800090 141199 265 1.44898 3.839797 Polychytrium aggregatum 110093 Fungi Fungi 187 6.3599999999999985e-43   NTclustered gi|2432152794|ref|XM_053111383.1| 110093 g139014 i0 81.778 25.3018867924528 225 39 85 2 38 261 274 497 Polychytrium aggregatum ribosomal protein L23/L15e core domain-containing protein (BJ171DRAFT_509392), mRNA blastn 6705 187 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;