RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA800053" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA800053 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10148371 10148371 PRJNA800053_P_NODE_10788_length_298_cov_4.355556_g10624_i0 PRJNA800053 10788 298 4.355556 12.97955688 Ploima 84394 Rotifera other_Eukaryota 429 1.1e-115   NTclustered gi|72153738|gb|DQ089740.1| 204736 g10624 i0 93.174 96 293 19 98 1 4 295 1723 1431 Brachionus urceolaris 28S ribosomal RNA gene, partial sequence blastn 28608 429 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus urceolaris
16098678 16098678 PRJNA800053_P_NODE_12853_length_280_cov_10.120773_g12689_i0 PRJNA800053 12853 280 10.120773 28.3381644 Cephalodella forficula 360656 Rotifera other_Eukaryota 507 4.58e-139   NTclustered gi|83285081|gb|DQ297693.1| 360656 g12689 i0 99.639 98.925 277 1 99 0 4 280 606 882 Cephalodella forficula 18S ribosomal RNA gene, partial sequence blastn 27699 507 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Notommatidae Cephalodella Cephalodella forficula
16522718 16522718 PRJNA800053_P_NODE_16093_length_258_cov_2.135135_g15929_i0 PRJNA800053 16093 258 2.135135 5.5086483 Ploima 84394 Rotifera other_Eukaryota 296 9.83e-76   NTclustered gi|83285183|gb|DQ297730.1| 360655 g15929 i0 88.095 82.6162790697674 252 26 96 4 11 258 1 252 Ascomorpha ovalis 28S ribosomal RNA gene, partial sequence blastn 21315 298 0.993288590604027 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Gastropidae Ascomorpha Ascomorpha ovalis
25022767 25022767 PRJNA800053_P_NODE_13720_length_274_cov_7.019900_g13556_i0 PRJNA800053 13720 274 7.0199 19.234526 Trichotria tetractis 360708 Rotifera other_Eukaryota 270 6.379999999999999e-68   NTclustered gi|83285213|gb|DQ297760.1| 360708 g13556 i0 86.831 8.88321167883212 243 31 88 1 30 271 579 337 Trichotria tetractis 28S ribosomal RNA gene, partial sequence blastn 2434 270 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Trichotriidae Trichotria Trichotria tetractis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;