contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA800053" and tax_phylum = "Planctomycetota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3347212 | 3347212 | PRJNA800053_P_NODE_17243_length_251_cov_1.724719_g17079_i0 | PRJNA800053 | 17243 | 251 | 1.724719 | 4.32904469 | uncultured Planctomycetota bacterium | 120965 | Bacteria | Bacteria | 322 | 1.57e-83 | NTclustered | gi|91221255|gb|DQ450803.1| | 120965 | g17079 | i0 | 91.489 | 92.3426294820717 | 235 | 19 | 94 | 1 | 13 | 247 | 1 | 234 | Uncultured planctomycete clone D01_WMSP1 16S ribosomal RNA gene, partial sequence | blastn | 23178 | 322 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | uncultured Planctomycetota bacterium | |||||
| 3771634 | 3771634 | PRJNA800053_P_NODE_9183_length_318_cov_1.571429_g9019_i0 | PRJNA800053 | 9183 | 318 | 1.571429 | 4.99714422 | Gemmata | 113 | Bacteria | Bacteria | 385 | 2.59e-102 | NTclustered | gi|1727537522|gb|CP042911.1| | 114 | g9019 | i0 | 88.854 | 179.839622641509 | 314 | 33 | 98 | 2 | 3 | 315 | 2022235 | 2021923 | Gemmata obscuriglobus strain DSM 5831 chromosome, complete genome | blastn | 57189 | 385 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata obscuriglobus | |
| 10148384 | 10148384 | PRJNA800053_P_NODE_16048_length_259_cov_1.026882_g15884_i0 | PRJNA800053 | 16048 | 259 | 1.026882 | 2.65962438 | root | 1 | Root_unresolved | Root_unresolved | 364 | 2.669999999999999e-96 | NTclustered | gi|1730068067|gb|CP042997.1| | 406548 | g15884 | i0 | 92.578 | 84.6988416988417 | 256 | 15 | 98 | 3 | 2 | 256 | 5179139 | 5178887 | Aquisphaera giovannonii strain OJF2 chromosome, complete genome | blastn | 21937 | 364 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Aquisphaera | Aquisphaera giovannonii | |
| 11000079 | 11000079 | PRJNA800053_P_NODE_17649_length_251_cov_0.865169_g17485_i0 | PRJNA800053 | 17649 | 251 | 0.865169 | 2.17157419 | Planctomyces sp. SH-PL14 | 1632864 | Bacteria | Bacteria | 383 | 7.099999999999999e-102 | NTclustered | gi|1015434452|gb|CP011270.1| | 1632864 | g17485 | i0 | 94.758 | 108.219123505976 | 248 | 9 | 98 | 4 | 5 | 250 | 4956771 | 4956526 | Planctomyces sp. SH-PL14, complete genome | blastn | 27163 | 383 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomyces | Planctomyces sp. SH-PL14 | |
| 12275609 | 12275609 | PRJNA800053_P_NODE_12850_length_281_cov_0.807692_g12686_i0 | PRJNA800053 | 12850 | 281 | 0.807692 | 2.26961452 | Humisphaera borealis | 2807512 | Bacteria | Bacteria | 224 | 5.1899999999999997e-54 | NTclustered | gi|1927742986|gb|CP063458.1| | 2807512 | g12686 | i0 | 89.503 | 121.964412811388 | 181 | 14 | 63 | 4 | 1 | 178 | 5063963 | 5064141 | Humisphaera borealis strain M1803 chromosome, complete genome | blastn | 34272 | 224 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Humisphaera | Humisphaera borealis | |
| 12275739 | 12275739 | PRJNA800053_P_NODE_7090_length_353_cov_1.553571_g6926_i0 | PRJNA800053 | 7090 | 353 | 1.553571 | 5.48410563 | Gemmata massiliana | 1210884 | Bacteria | Bacteria | 516 | 9.85e-142 | NTclustered | gi|1804905141|emb|LR593886.1| | 1210884 | g6926 | i0 | 93.201 | 235.750708215297 | 353 | 21 | 100 | 2 | 1 | 353 | 3633797 | 3633448 | Gemmata massiliana isolate Soil9 genome assembly, chromosome: 1 | blastn | 83220 | 516 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata massiliana | |
| 14824517 | 14824517 | PRJNA800053_P_NODE_11332_length_293_cov_1.254545_g11168_i0 | PRJNA800053 | 11332 | 293 | 1.254545 | 3.67581685 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 470 | 6.33e-128 | NTclustered | gi|576295676|gb|KF787065.1| | 100233 | g11168 | i0 | 97.794 | 93.1843003412969 | 272 | 6 | 93 | 0 | 4 | 275 | 522 | 793 | Uncultured Planctomycetaceae bacterium clone S2-10-026 16S ribosomal RNA gene, partial sequence | blastn | 27303 | 470 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 14824652 | 14824652 | PRJNA800053_P_NODE_3272_length_486_cov_3.232446_g3109_i0 | PRJNA800053 | 3272 | 486 | 3.232446 | 15.70968756 | Gemmata sp. SH-PL17 | 1630693 | Bacteria | Bacteria | 512 | 1.81e-140 | NTclustered | gi|1015440974|gb|CP011271.1| | 1630693 | g3109 | i0 | 85.979 | 108.413580246914 | 485 | 60 | 99 | 7 | 6 | 486 | 557363 | 557843 | Gemmata sp. SH-PL17, complete genome | blastn | 52689 | 512 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata sp. SH-PL17 | |
| 16098814 | 16098814 | PRJNA800053_P_NODE_9313_length_316_cov_1.938272_g9149_i0 | PRJNA800053 | 9313 | 316 | 1.938272 | 6.12493952 | Humisphaera borealis | 2807512 | Bacteria | Bacteria | 257 | 5.8400000000000005e-64 | NTclustered | gi|1927742986|gb|CP063458.1| | 2807512 | g9149 | i0 | 81.651 | 40.7278481012658 | 327 | 45 | 99 | 4 | 1 | 313 | 5063492 | 5063167 | Humisphaera borealis strain M1803 chromosome, complete genome | blastn | 12870 | 257 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Humisphaera | Humisphaera borealis | |
| 22897462 | 22897462 | PRJNA800053_P_NODE_6618_length_363_cov_1.575862_g6454_i0 | PRJNA800053 | 6618 | 363 | 1.575862 | 5.72037906 | Gemmata | 113 | Bacteria | Bacteria | 303 | 8.61e-78 | NTclustered | gi|1727537522|gb|CP042911.1| | 114 | g6454 | i0 | 82.222 | 86.831955922865 | 360 | 56 | 99 | 7 | 1 | 357 | 4797994 | 4798348 | Gemmata obscuriglobus strain DSM 5831 chromosome, complete genome | blastn | 31520 | 303 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata obscuriglobus | |
| 23748938 | 23748938 | PRJNA800053_P_NODE_23519_length_241_cov_1.470238_g23355_i0 | PRJNA800053 | 23519 | 241 | 1.470238 | 3.54327358 | Tautonia plasticadhaerens | 2527974 | Bacteria | Bacteria | 267 | 7.12e-67 | NTclustered | gi|1712713678|gb|CP036426.1| | 2527974 | g23355 | i0 | 87.288 | 105.248962655602 | 236 | 27 | 98 | 3 | 4 | 239 | 267177 | 267409 | Tautonia plasticadhaerens strain ElP chromosome | blastn | 25365 | 267 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Tautonia | Tautonia plasticadhaerens | |
| 24171526 | 24171526 | PRJNA800053_P_NODE_6019_length_376_cov_2.244224_g5856_i0 | PRJNA800053 | 6019 | 376 | 2.244224 | 8.43828224 | Gemmata | 113 | Bacteria | Bacteria | 579 | 1.3299999999999997e-160 | NTclustered | gi|1804905141|emb|LR593886.1| | 1210884 | g5856 | i0 | 94.638 | 124.438829787234 | 373 | 20 | 99 | 0 | 2 | 374 | 3634344 | 3633972 | Gemmata massiliana isolate Soil9 genome assembly, chromosome: 1 | blastn | 46789 | 579 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata massiliana |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;