RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA800053" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA800053 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3347210 3347210 PRJNA800053_P_NODE_16603_length_255_cov_1.637363_g16439_i0 PRJNA800053 16603 255 1.637363 4.17527565 Cucumovirus CMV 3428131 Viruses Viruses 453 5.44e-123   NTclustered gi|2594385161|gb|OL695912.1| 12305 g16439 i0 99.206 96.9372549019608 252 1 98 1 4 254 129 380 Cucumber mosaic virus isolate ZARCu coat protein gene, complete cds blastn 24719 453 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Cucumovirus Cucumovirus CMV
7174499 7174499 PRJNA800053_P_NODE_15766_length_260_cov_2.326203_g15602_i0 PRJNA800053 15766 260 2.326203 6.0481278 Tolivirales sp. 2809914 Viruses Viruses 468 1.99e-127   NTclustered gi|2647549764|gb|OR843730.1| 2809914 g15602 i0 99.609 0.984615384615385 256 1 98 0 4 259 646 901 Tolivirales sp. strain MR233-17E/3903 polyprotein, hypothetical protein, and structural protein genes, complete cds blastn 256 468 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;