RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA800053" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA800053 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19923087 19923087 PRJNA800053_P_NODE_9416_length_315_cov_1.252066_g9252_i0 PRJNA800053 9416 315 1.252066 3.9440079 Herpetosiphon aurantiacus 65 Bacteria Bacteria 185 2.7899999999999998e-42   NTclustered gi|159889572|gb|CP000875.1| 316274 g9252 i0 80.567 0.784126984126984 247 43 78 5 6 250 4626987 4626744 Herpetosiphon aurantiacus DSM 785, complete genome blastn 247 185 1 Bacteria   Bacillati Chloroflexota Chloroflexia Herpetosiphonales Herpetosiphonaceae Herpetosiphon Herpetosiphon aurantiacus
21198699 21198699 PRJNA800053_P_NODE_5737_length_384_cov_1.430868_g5574_i0 PRJNA800053 5737 384 1.430868 5.49453312 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 329 1.51e-85   NTclustered gi|2874254132|emb|OY970217.1| 1672391 g5574 i0 83.113 488.630208333333 379 47 97 16 1 371 3521707 3522076 MAG: uncultured Chloroflexia bacterium isolate MFD05684.bin.1.130 genome assembly, chromosome: 1 blastn 187634 329 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;