RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA800053" and tax_phylum = "Candidatus Peregrinibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Peregrinibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA800053 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8449216 8449216 PRJNA800053_P_NODE_13047_length_279_cov_1.888350_g12883_i0 PRJNA800053 13047 279 1.88835 5.2684965 Candidatus Peribacter riflensis 1735162 Bacteria Bacteria 243 1.42e-59   NTclustered gi|946529367|gb|CP013062.1| 1735162 g12883 i0 82.609 162.591397849462 276 46 99 1 1 276 1195102 1194829 MAG: Candidatus Peribacter riflensis, complete genome blastn 45363 243 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria Candidatus Peribacterales   Candidatus Peribacter Candidatus Peribacter riflensis
21198571 21198571 PRJNA800053_P_NODE_12597_length_282_cov_3.430622_g12433_i0 PRJNA800053 12597 282 3.430622 9.67435404 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 248 3.09e-61   NTclustered gi|2225492643|gb|CP082927.1| 2053688 g12433 i0 83.577 71.0744680851064 274 35 95 9 12 279 192631 192362 MAG: Candidatus Peribacteria bacterium isolate LakeFargette_0920_ALND_MAG_52_24 chromosome, complete genome blastn 20043 248 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;