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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA800053" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA800053 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
796191 796191 PRJNA800053_P_NODE_20201_length_247_cov_0.885057_g20037_i0 PRJNA800053 20201 247 0.885057 2.18609079 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 239 1.6e-58   NTclustered gi|2874254091|emb|OY970174.1| 171953 g20037 i0 84.362 0.983805668016194 243 38 98 0 2 244 2769369 2769611 MAG: uncultured Acidobacteriota bacterium isolate MFD01275.bin.c.18 genome assembly, chromosome: 1 blastn 243 239 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
4624628 4624628 PRJNA800053_P_NODE_1844_length_618_cov_1.396330_g1690_i0 PRJNA800053 1844 618 1.39633 8.6293194 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 645 2.209999999999999e-180   NTclustered gi|2621707050|emb|OY764903.1| 2212468 g1690 i0 85.714 89.7087378640777 623 75 99 13 4 618 3558056 3557440 MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 blastn 55440 645 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
9724233 9724233 PRJNA800053_P_NODE_12068_length_287_cov_0.948598_g11904_i0 PRJNA800053 12068 287 0.948598 2.72247626 Acidobacteriota bacterium 1978231 Bacteria Bacteria 289 1.8600000000000003e-73   NTclustered gi|1958085512|gb|CP065000.1| 1978231 g11904 i0 86.692 81.0696864111498 263 31 90 4 27 285 3298459 3298197 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome blastn 23267 289 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
14824570 14824570 PRJNA800053_P_NODE_16132_length_258_cov_1.654054_g15968_i0 PRJNA800053 16132 258 1.654054 4.26745932 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 344 3.46e-90   NTclustered gi|2874253677|emb|OY969111.1| 171953 g15968 i0 91.339 100.961240310078 254 19 98 3 3 255 715997 716248 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.3 genome assembly, chromosome: 1 blastn 26048 344 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
19071651 19071651 PRJNA800053_P_NODE_6775_length_360_cov_1.055749_g6611_i0 PRJNA800053 6775 360 1.055749 3.8006964 Bacteria 2 Bacteria Bacteria 566 9.849999999999999e-157   NTclustered gi|2874254167|emb|OY970399.1| 171953 g6611 i0 95.028 102.394444444444 362 15 100 3 1 360 2284744 2284384 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.6 genome assembly, chromosome: 1 blastn 36862 568 0.996478873239437 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
21198649 21198649 PRJNA800053_P_NODE_21837_length_244_cov_0.900585_g21673_i0 PRJNA800053 21837 244 0.900585 2.1974274 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 375 1.15e-99   NTclustered gi|2874254027|emb|OY970352.1| 171953 g21673 i0 95.339 116.41803278688499 236 11 97 0 4 239 2367588 2367353 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.5 genome assembly, chromosome: 1 blastn 28406 375 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
22897450 22897450 PRJNA800053_P_NODE_24478_length_234_cov_2.024845_g24314_i0 PRJNA800053 24478 234 2.024845 4.7381373 Bacteria 2 Bacteria Bacteria 324 4.02e-84   NTclustered gi|2874254108|emb|OY970193.1| 171953 g24314 i0 92.92 463.452991452991 226 11 96 5 9 232 1689819 1690041 MAG: uncultured Acidobacteriota bacterium isolate MFD09206.bin.1.42 genome assembly, chromosome: 1 blastn 108448 327 0.990825688073395 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
25446533 25446533 PRJNA800053_P_NODE_17700_length_251_cov_0.865169_g17536_i0 PRJNA800053 17700 251 0.865169 2.17157419 Bacteria 2 Bacteria Bacteria 239 1.6300000000000002e-58   NTclustered gi|217038907|gb|EU810998.1| 171953 g17536 i0 100 98.8764940239044 129 0 51 0 4 132 129 1 Uncultured Acidobacteria bacterium clone 01QCK 23S ribosomal RNA gene, partial sequence blastn 24818 239 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;