RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA800053" and tax_clade = "CRESS viruses"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • CRESS viruses · 2 ✖

bioproject 1

  • PRJNA800053 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13973792 13973792 PRJNA800053_P_NODE_16451_length_256_cov_1.562842_g16287_i0 PRJNA800053 16451 256 1.562842 4.00087552 Viruses 10239 Viruses Viruses 462 9.07e-126   NTclustered gi|1848664582|gb|MN891788.1| 2740165 g16287 i0 99.219 2.98828125 256 2 100 0 1 256 416 161 Brassica caulorapa CRESS virus strain pt079-cirl-1, complete genome blastn 765 462 1 Viruses CRESS viruses Shotokuvirae Cressdnaviricota         Brassica caulorapa CRESS virus
21621951 21621951 PRJNA800053_P_NODE_13357_length_277_cov_1.455882_g13193_i0 PRJNA800053 13357 277 1.455882 4.03279314 Viruses 10239 Viruses Viruses 501 2.11e-137   NTclustered gi|1848664582|gb|MN891788.1| 2740165 g13193 i0 99.635 2.96750902527076 274 1 99 0 1 274 1010 737 Brassica caulorapa CRESS virus strain pt079-cirl-1, complete genome blastn 822 501 1 Viruses CRESS viruses Shotokuvirae Cressdnaviricota         Brassica caulorapa CRESS virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;