RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA800053" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA800053 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
796153 796153 PRJNA800053_P_NODE_15621_length_261_cov_1.632979_g15457_i0 PRJNA800053 15621 261 1.632979 4.26207519 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 477 3.3099999999999986e-130   NTclustered gi|1958015594|gb|CP064967.1| 2282149 g15457 i0 100 0.988505747126437 258 0 99 0 4 261 151764 151507 MAG: Candidatus Roizmanbacteria bacterium isolate Damh_18-Q3-R51-60_BAT3C.63_uni chromosome, complete genome blastn 258 477 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium
4624598 4624598 PRJNA800053_P_NODE_13984_length_272_cov_4.376884_g13820_i0 PRJNA800053 13984 272 4.376884 11.90512448 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 244 3.8399999999999996e-60   NTclustered gi|2258874150|gb|CP060230.1| 2052152 g13820 i0 83.774 76.3676470588235 265 35 97 6 2 264 385881 386139 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-34 chromosome blastn 20772 244 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
8449216 8449216 PRJNA800053_P_NODE_13047_length_279_cov_1.888350_g12883_i0 PRJNA800053 13047 279 1.88835 5.2684965 Candidatus Peribacter riflensis 1735162 Bacteria Bacteria 243 1.42e-59   NTclustered gi|946529367|gb|CP013062.1| 1735162 g12883 i0 82.609 162.591397849462 276 46 99 1 1 276 1195102 1194829 MAG: Candidatus Peribacter riflensis, complete genome blastn 45363 243 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria Candidatus Peribacterales   Candidatus Peribacter Candidatus Peribacter riflensis
21198571 21198571 PRJNA800053_P_NODE_12597_length_282_cov_3.430622_g12433_i0 PRJNA800053 12597 282 3.430622 9.67435404 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 248 3.09e-61   NTclustered gi|2225492643|gb|CP082927.1| 2053688 g12433 i0 83.577 71.0744680851064 274 35 95 9 12 279 192631 192362 MAG: Candidatus Peribacteria bacterium isolate LakeFargette_0920_ALND_MAG_52_24 chromosome, complete genome blastn 20043 248 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;