RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

31 rows where analysis = "blastn", bioproject = "PRJNA799842" and tax_superkingdom = "Archaea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Archaea · 31 ✖

bioproject 1

  • PRJNA799842 · 31 ✖

analysis 1

  • blastn · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
794316 794316 PRJNA799842_P_NODE_187881_length_241_cov_0.916667_g186308_i0 PRJNA799842 187881 241 0.916667 2.20916747 Methanothrix sp. 90426 Archaea Archaea 278 3.29e-70   NTclustered gi|2626216449|emb|OY821645.1| 90426 g186308 i0 87.764 4.64730290456432 237 29 98 0 1 237 1536713 1536949 MAG: Methanothrix sp. isolate d1628e35-7b52-4540-a147-c2ca1342adce genome assembly, chromosome: 1 blastn 1120 278 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
2071595 2071595 PRJNA799842_P_NODE_85622_length_312_cov_2.255230_g84049_i0 PRJNA799842 85622 312 2.25523 7.0363176 Halococcus qingdaonensis 224402 Archaea Archaea 577 3.89e-160   NTclustered gi|254971282|ref|NR_028200.1| 224402 g84049 i0 100 97.6282051282051 312 0 100 0 1 312 1442 1131 Halococcus qingdaonensis strain CM5 16S ribosomal RNA, complete sequence blastn 30460 577 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus qingdaonensis
2071845 2071845 PRJNA799842_P_NODE_97702_length_294_cov_1.199095_g96129_i0 PRJNA799842 97702 294 1.199095 3.5253393 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 159 1.56e-34   NTclustered gi|2874253637|emb|OY968763.1| 2026714 g96129 i0 77.174 0.938775510204082 276 61 94 2 1 275 942839 942565 MAG: Candidatus Bathyarchaeota archaeon isolate MFD01299.bin.2.105 genome assembly, chromosome: 1 blastn 276 159 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
3344417 3344417 PRJNA799842_P_NODE_136183_length_251_cov_0.865169_g134610_i0 PRJNA799842 136183 251 0.865169 2.17157419 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 60.2 1.36e-4   NTclustered gi|2874253955|emb|OY970280.1| 2026714 g134610 i0 85.714 0.223107569721116 56 8 22 0 191 246 1721998 1722053 MAG: Candidatus Bathyarchaeota archaeon isolate MFD03726.bin.1.102 genome assembly, chromosome: 1 blastn 56 60.2 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
3344432 3344432 PRJNA799842_P_NODE_137003_length_251_cov_0.865169_g135430_i0 PRJNA799842 137003 251 0.865169 2.17157419 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 220 5.89e-53   NTclustered gi|2874253764|emb|OY969706.1| 2026714 g135430 i0 82.54 1.00398406374502 252 42 100 2 1 251 2370338 2370588 MAG: Candidatus Bathyarchaeota archaeon isolate MFD02416.bin.c.15 genome assembly, chromosome: 1 blastn 252 220 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
3344854 3344854 PRJNA799842_P_NODE_160943_length_246_cov_0.890173_g159370_i0 PRJNA799842 160943 246 0.890173 2.18982558 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 135 2.14e-27   NTclustered gi|2874253955|emb|OY970280.1| 2026714 g159370 i0 86.4 1.73577235772358 125 16 51 1 120 244 1260955 1261078 MAG: Candidatus Bathyarchaeota archaeon isolate MFD03726.bin.1.102 genome assembly, chromosome: 1 blastn 427 135 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
3345098 3345098 PRJNA799842_P_NODE_173603_length_244_cov_0.900585_g172030_i0 PRJNA799842 173603 244 0.900585 2.1974274 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 167 7.529999999999998e-37   NTclustered gi|2874253637|emb|OY968763.1| 2026714 g172030 i0 81.25 0.852459016393443 208 38 85 1 28 234 417505 417298 MAG: Candidatus Bathyarchaeota archaeon isolate MFD01299.bin.2.105 genome assembly, chromosome: 1 blastn 208 167 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
3345327 3345327 PRJNA799842_P_NODE_186603_length_241_cov_0.916667_g185030_i0 PRJNA799842 186603 241 0.916667 2.20916747 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 150 7.48e-32   NTclustered gi|2874253637|emb|OY968763.1| 2026714 g185030 i0 78.481 0.983402489626556 237 46 97 5 3 236 838391 838625 MAG: Candidatus Bathyarchaeota archaeon isolate MFD01299.bin.2.105 genome assembly, chromosome: 1 blastn 237 150 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
3347049 3347049 PRJNA799842_P_NODE_95623_length_297_cov_1.218750_g94050_i0 PRJNA799842 95623 297 1.21875 3.6196875 Candidatus Heimdallarchaeum endolithica 2876572 Archaea Archaea 54.7 0.008   NTclustered gi|2180470024|gb|CP084167.1| 2876572 g94050 i0 96.875 0.107744107744108 32 1 11 0 156 187 851681 851650 MAG: Candidatus Heimdallarchaeum endolithica isolate PR6 chromosome, complete genome blastn 32 54.7 1 Archaea   Promethearchaeati Candidatus Heimdallarchaeota Candidatus Heimdallarchaeia (ex Rinke et al. 2021) (nom. nud.) Candidatus Heimdallarchaeales Candidatus Heimdallarchaeaceae Candidatus Heimdallarchaeum Candidatus Heimdallarchaeum endolithica
4621941 4621941 PRJNA799842_P_NODE_146224_length_249_cov_0.875000_g144651_i0 PRJNA799842 146224 249 0.875 2.17875 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 252 2.07e-62   NTclustered gi|2874253637|emb|OY968763.1| 2026714 g144651 i0 85.259 1.00803212851406 251 30 99 5 4 249 779618 779866 MAG: Candidatus Bathyarchaeota archaeon isolate MFD01299.bin.2.105 genome assembly, chromosome: 1 blastn 251 252 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
4622119 4622119 PRJNA799842_P_NODE_156564_length_247_cov_0.885057_g154991_i0 PRJNA799842 156564 247 0.885057 2.18609079 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 198 2.71e-46   NTclustered gi|937513727|gb|CP012850.1| 1353260 g154991 i0 83.486 2.64372469635628 218 31 87 4 32 245 573679 573895 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 653 198 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
5046840 5046840 PRJNA799842_P_NODE_130984_length_255_cov_1.258242_g129411_i0 PRJNA799842 130984 255 1.258242 3.2085171 Halobacteriales 2235 Archaea Archaea 472 1.5e-128   NTclustered gi|1675273172|gb|MN000365.1| 29284 g129411 i0 100 100 255 0 100 0 1 255 141 395 Halorubrum trapanicum strain ISD451 16S ribosomal RNA gene, partial sequence blastn 25500 472 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum trapanicum
5897141 5897141 PRJNA799842_P_NODE_145145_length_249_cov_0.875000_g143572_i0 PRJNA799842 145145 249 0.875 2.17875 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 191 4.58e-44   NTclustered gi|2874254015|emb|OY970340.1| 2026714 g143572 i0 83.568 0.855421686746988 213 26 82 6 1 204 986844 986632 MAG: Candidatus Bathyarchaeota archaeon isolate MFD04492.bin.c.5 genome assembly, chromosome: 1 blastn 213 191 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
7173650 7173650 PRJNA799842_P_NODE_63966_length_356_cov_1.448763_g62393_i0 PRJNA799842 63966 356 1.448763 5.15759628 Methanobacterium petrolearium 710190 Archaea Archaea 52.8 0.034   NTclustered gi|2465759960|dbj|AP027739.1| 710190 g62393 i0 100 0.0786516853932584 28 0 8 0 18 45 2141122 2141149 Methanobacterium petrolearium NBRC 105198 DNA, complete genome blastn 28 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium petrolearium
8446999 8446999 PRJNA799842_P_NODE_167447_length_245_cov_0.895349_g165874_i0 PRJNA799842 167447 245 0.895349 2.19360505 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 200 7.46e-47   NTclustered gi|2874253718|emb|OY969560.1| 2026714 g165874 i0 81.857 1.93469387755102 237 43 97 0 9 245 43634 43398 MAG: Candidatus Bathyarchaeota archaeon isolate MFD01872.bin.2.150 genome assembly, chromosome: 1 blastn 474 200 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
8447105 8447105 PRJNA799842_P_NODE_173787_length_244_cov_0.900585_g172214_i0 PRJNA799842 173787 244 0.900585 2.1974274 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 78.7 3.63e-10   NTclustered gi|2108177613|gb|CP070714.1| 2026714 g172214 i0 79.13 0.471311475409836 115 22 47 2 26 139 804893 805006 MAG: Candidatus Bathyarchaeota archaeon isolate bin490 chromosome blastn 115 78.7 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
9722531 9722531 PRJNA799842_P_NODE_21108_length_654_cov_1.521515_g19598_i0 PRJNA799842 21108 654 1.521515 9.9507081 Halococcus dombrowskii 179637 Archaea Archaea 1192 0   NTclustered gi|2221493270|gb|CP095009.1| 179637 g19598 i0 99.541 147.807339449541 654 3 100 0 1 654 172534 171881 Halococcus dombrowskii strain H4 plasmid unnamed4, complete sequence blastn 96666 1192 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus dombrowskii
10996959 10996959 PRJNA799842_P_NODE_117029_length_271_cov_1.166667_g115456_i0 PRJNA799842 117029 271 1.166667 3.16166757 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 200 8.39e-47   NTclustered gi|2874253764|emb|OY969706.1| 2026714 g115456 i0 82.083 3.68634686346863 240 37 87 6 1 237 2619136 2618900 MAG: Candidatus Bathyarchaeota archaeon isolate MFD02416.bin.c.15 genome assembly, chromosome: 1 blastn 999 200 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
12272155 12272155 PRJNA799842_P_NODE_107670_length_282_cov_1.100478_g106097_i0 PRJNA799842 107670 282 1.100478 3.10334796 uncultured archaeon 115547 Archaea Archaea 409 1.34e-109   NTclustered gi|224566361|gb|FJ184680.1| 115547 g106097 i0 92.908 98.3617021276596 282 19 99 1 1 281 92 373 Uncultured archaeon clone R115 16S ribosomal RNA gene, partial sequence blastn 27738 409 1 Archaea               uncultured archaeon
12699344 12699344 PRJNA799842_P_NODE_92390_length_302_cov_1.008734_g90817_i0 PRJNA799842 92390 302 1.008734 3.04637668 Natronomonadaceae 3402413 Archaea Archaea 531 2.9599999999999993e-146   NTclustered gi|339777447|gb|HQ738834.1| 1053638 g90817 i0 98.344 99.9569536423841 302 5 100 0 1 302 1298 997 Halomarina sp. TRM46053 16S ribosomal RNA gene, partial sequence blastn 30187 536 0.990671641791045 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Halomarina Halomarina sp. TRM46053
14822276 14822276 PRJNA799842_P_NODE_167772_length_245_cov_0.895349_g166199_i0 PRJNA799842 167772 245 0.895349 2.19360505 Pyrobaculum aerophilum 13773 Archaea Archaea 448 2.41e-121   NTclustered gi|18308975|gb|AE009441.1| 178306 g166199 i0 99.592 1 245 1 100 0 1 245 1746322 1746566 Pyrobaculum aerophilum str. IM2, complete genome blastn 245 448 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum aerophilum
15247876 15247876 PRJNA799842_P_NODE_67572_length_347_cov_1.562044_g65999_i0 PRJNA799842 67572 347 1.562044 5.42029268 Halobacteriales 2235 Archaea Archaea 636 7.13e-178   NTclustered gi|407907317|gb|JX481744.1| 2250 g65999 i0 99.712 99.9423631123919 347 1 100 0 1 347 505 851 Halococcus morrhuae strain 123 16S ribosomal RNA gene, partial sequence blastn 34680 636 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus morrhuae
16096292 16096292 PRJNA799842_P_NODE_158953_length_247_cov_0.885057_g157380_i0 PRJNA799842 158953 247 0.885057 2.18609079 Halococcus dombrowskii 179637 Archaea Archaea 418 1.9099999999999998e-112   NTclustered gi|2221489803|gb|CP095005.1| 179637 g157380 i0 97.166 11.82995951417 247 7 100 0 1 247 445661 445907 Halococcus dombrowskii strain H4 chromosome, complete genome blastn 2922 418 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus dombrowskii
16097297 16097297 PRJNA799842_P_NODE_37453_length_468_cov_1.475949_g35882_i0 PRJNA799842 37453 468 1.475949 6.90744132 Halocatena marina 2934937 Archaea Archaea 760 0   NTclustered gi|2324023557|gb|CP109979.1| 2934937 g35882 i0 95.94 123.491452991453 468 19 100 0 1 468 881984 882451 Halocatena marina strain QDMS1 chromosome, complete genome blastn 57794 760 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Halocatena Halocatena marina
17371222 17371222 PRJNA799842_P_NODE_106434_length_283_cov_1.461905_g104861_i0 PRJNA799842 106434 283 1.461905 4.13719115 Ferroglobus placidus 54261 Archaea Archaea 52.8 0.026   NTclustered gi|288892655|gb|CP001899.1| 589924 g104861 i0 96.774 0.109540636042403 31 1 11 0 161 191 1953707 1953737 Ferroglobus placidus DSM 10642, complete genome blastn 31 52.8 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales Archaeoglobaceae Ferroglobus Ferroglobus placidus
20345323 20345323 PRJNA799842_P_NODE_16516_length_756_cov_1.500732_g15087_i0 PRJNA799842 16516 756 1.500732 11.34553392 Halococcus 2249 Archaea Archaea 1367 0   NTclustered gi|288192|emb|X72588.1| 2250 g15087 i0 99.339 169.800264550265 756 4 100 1 1 756 5024 4270 H.morrhuae ribosomal RNA operon and flanking regions blastn 128369 1375 0.99418181818181794 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus morrhuae
22472691 22472691 PRJNA799842_P_NODE_74458_length_333_cov_0.861538_g72885_i0 PRJNA799842 74458 333 0.861538 2.86892154 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 228 4.8599999999999986e-55   NTclustered gi|2874253637|emb|OY968763.1| 2026714 g72885 i0 78.979 1 333 70 100 0 1 333 335856 335524 MAG: Candidatus Bathyarchaeota archaeon isolate MFD01299.bin.2.105 genome assembly, chromosome: 1 blastn 333 228 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
23746005 23746005 PRJNA799842_P_NODE_130259_length_256_cov_0.961749_g128686_i0 PRJNA799842 130259 256 0.961749 2.46207744 uncultured crenarchaeote 29281 Archaea Archaea 416 7.159999999999998e-112   NTclustered gi|42557759|emb|AJ627422.1| 29281 g128686 i0 96.094 1 256 8 100 1 1 256 10708 10961 Uncultured crenarchaeote genomic fragment 54d9 blastn 256 416 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
23746041 23746041 PRJNA799842_P_NODE_131859_length_254_cov_1.276243_g130286_i0 PRJNA799842 131859 254 1.276243 3.24165722 Methanolapillus millepedarum 3028296 Archaea Archaea 54.7 0.006   NTclustered gi|2591776341|gb|CP131060.1| 3028296 g130286 i0 96.97 0.12992125984252 33 0 13 1 54 86 161923 161954 Methanolapillus millepedarum strain Ac7 chromosome, complete genome blastn 33 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolapillus Methanolapillus millepedarum
25020557 25020557 PRJNA799842_P_NODE_172100_length_244_cov_0.900585_g170527_i0 PRJNA799842 172100 244 0.900585 2.1974274 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 333 7.019999999999999e-87   NTclustered gi|2874253764|emb|OY969706.1| 2026714 g170527 i0 91.701 2.99180327868852 241 19 98 1 2 241 675103 674863 MAG: Candidatus Bathyarchaeota archaeon isolate MFD02416.bin.c.15 genome assembly, chromosome: 1 blastn 730 333 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
25446327 25446327 PRJNA799842_P_NODE_76600_length_328_cov_2.403922_g75027_i0 PRJNA799842 76600 328 2.403922 7.88486416 Natronomonadaceae 3402413 Archaea Archaea 527 4.209999999999999e-145   NTclustered gi|311336615|gb|HQ400551.1| 115547 g75027 i0 95.719 99.0487804878049 327 14 99 0 1 327 506 180 Uncultured archaeon clone CK542 16S ribosomal RNA gene, partial sequence blastn 32488 527 1 Archaea               uncultured archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;