RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA799842" and tax_phylum = "Nucleocytoviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Nucleocytoviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA799842 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5897865 5897865 PRJNA799842_P_NODE_186365_length_241_cov_1.011905_g184792_i0 PRJNA799842 186365 241 1.011905 2.43869105 Alphaorpheovirus massiliense 3426221 Viruses Viruses 52.8 0.022   NTclustered gi|1315688781|emb|LT906555.1| 2023057 g184792 i0 100 0.116182572614108 28 0 12 0 214 241 113715 113688 Orpheovirus IHUMI-LCC2 genome assembly, complete genome: monopartite blastn 28 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Orpheoviridae Alphaorpheovirus Alphaorpheovirus massiliense
12272969 12272969 PRJNA799842_P_NODE_150810_length_248_cov_0.880000_g149237_i0 PRJNA799842 150810 248 0.88 2.1824 Moumouvirus sp. 'maliensis' 2682469 Viruses Viruses 52.8 0.022   NTclustered gi|1780386545|gb|MK978772.1| 2682469 g149237 i0 100 0.112903225806452 28 0 11 0 3 30 65499 65472 Moumouvirus maliensis, complete genome blastn 28 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Moumouvirus Moumouvirus sp. 'maliensis'
13546937 13546937 PRJNA799842_P_NODE_134811_length_251_cov_1.050562_g133238_i0 PRJNA799842 134811 251 1.050562 2.63691062 Moumouvirus sp. 'maliensis' 2682469 Viruses Viruses 52.8 0.023   NTclustered gi|1780386545|gb|MK978772.1| 2682469 g133238 i0 100 0.111553784860558 28 0 11 0 47 74 126291 126264 Moumouvirus maliensis, complete genome blastn 28 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Moumouvirus Moumouvirus sp. 'maliensis'

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;