contig_metadata
24 rows where analysis = "blastn", bioproject = "PRJNA799842" and tax_phylum = "Nitrospirota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3345181 | 3345181 | PRJNA799842_P_NODE_178023_length_243_cov_0.905882_g176450_i0 | PRJNA799842 | 178023 | 243 | 0.905882 | 2.20129326 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 438 | 1.4399999999999996e-118 | NTclustered | gi|2290906964|gb|CP058931.1| | 70125 | g176450 | i0 | 99.18 | 1.00411522633745 | 244 | 1 | 100 | 1 | 1 | 243 | 3207317 | 3207074 | MAG: Nitrospira sp. isolate DJ chromosome | blastn | 244 | 438 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 3770609 | 3770609 | PRJNA799842_P_NODE_164463_length_246_cov_0.890173_g162890_i0 | PRJNA799842 | 164463 | 246 | 0.890173 | 2.18982558 | Nitrospira | 1234 | Bacteria | Bacteria | 196 | 9.7e-46 | NTclustered | gi|2290906964|gb|CP058931.1| | 70125 | g162890 | i0 | 95.868 | 2.40243902439024 | 121 | 5 | 95 | 0 | 126 | 246 | 3592953 | 3592833 | MAG: Nitrospira sp. isolate DJ chromosome | blastn | 591 | 196 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 4621960 | 4621960 | PRJNA799842_P_NODE_147304_length_249_cov_0.875000_g145731_i0 | PRJNA799842 | 147304 | 249 | 0.875 | 2.17875 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 387 | 5.439999999999998e-103 | NTclustered | gi|2290906964|gb|CP058931.1| | 70125 | g145731 | i0 | 94.758 | 3.00803212851406 | 248 | 13 | 99 | 0 | 1 | 248 | 3144573 | 3144326 | MAG: Nitrospira sp. isolate DJ chromosome | blastn | 749 | 387 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 5897612 | 5897612 | PRJNA799842_P_NODE_172685_length_244_cov_0.900585_g171112_i0 | PRJNA799842 | 172685 | 244 | 0.900585 | 2.1974274 | Candidatus Nitrospira kreftii | 2652173 | Bacteria | Bacteria | 387 | 5.31e-103 | NTclustered | gi|1884724763|gb|CP047423.1| | 2652173 | g171112 | i0 | 95.455 | 0.991803278688525 | 242 | 11 | 99 | 0 | 1 | 242 | 1463796 | 1464037 | Candidatus Nitrospira kreftii isolate comreactor17 chromosome, complete genome | blastn | 242 | 387 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Candidatus Nitrospira kreftii | ||
| 8446622 | 8446622 | PRJNA799842_P_NODE_148287_length_249_cov_0.875000_g146714_i0 | PRJNA799842 | 148287 | 249 | 0.875 | 2.17875 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 339 | 1.5399999999999998e-88 | NTclustered | gi|2290907019|gb|CP060499.1| | 70125 | g146714 | i0 | 91.498 | 3.90763052208835 | 247 | 19 | 99 | 2 | 4 | 249 | 1558984 | 1558739 | MAG: Nitrospira sp. isolate DH1 chromosome, complete genome | blastn | 973 | 339 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 9721946 | 9721946 | PRJNA799842_P_NODE_160728_length_246_cov_0.890173_g159155_i0 | PRJNA799842 | 160728 | 246 | 0.890173 | 2.18982558 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 444 | 3.14e-120 | NTclustered | gi|2290906964|gb|CP058931.1| | 70125 | g159155 | i0 | 99.187 | 3 | 246 | 2 | 100 | 0 | 1 | 246 | 1658291 | 1658536 | MAG: Nitrospira sp. isolate DJ chromosome | blastn | 738 | 444 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 9722000 | 9722000 | PRJNA799842_P_NODE_163868_length_246_cov_0.890173_g162295_i0 | PRJNA799842 | 163868 | 246 | 0.890173 | 2.18982558 | Candidatus Nitrospira allomarina | 3020900 | Bacteria | Bacteria | 427 | 3.16e-115 | NTclustered | gi|2582126190|gb|CP116967.1| | 3020900 | g162295 | i0 | 97.967 | 2.99186991869919 | 246 | 5 | 100 | 0 | 1 | 246 | 1075650 | 1075405 | Candidatus Nitrospira allomarina strain VA chromosome, complete genome | blastn | 736 | 427 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Candidatus Nitrospira allomarina | ||
| 9722059 | 9722059 | PRJNA799842_P_NODE_167828_length_245_cov_0.895349_g166255_i0 | PRJNA799842 | 167828 | 245 | 0.895349 | 2.19360505 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 414 | 2.45e-111 | NTclustered | gi|2290906964|gb|CP058931.1| | 70125 | g166255 | i0 | 97.143 | 2.96734693877551 | 245 | 7 | 100 | 0 | 1 | 245 | 558606 | 558362 | MAG: Nitrospira sp. isolate DJ chromosome | blastn | 727 | 414 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 9722320 | 9722320 | PRJNA799842_P_NODE_181508_length_242_cov_0.911243_g179935_i0 | PRJNA799842 | 181508 | 242 | 0.911243 | 2.20520806 | Candidatus Nitrospira neomarina | 3020899 | Bacteria | Bacteria | 182 | 2.66e-41 | NTclustered | gi|2582130041|gb|CP116968.1| | 3020899 | g179935 | i0 | 84.127 | 0.78099173553719 | 189 | 28 | 78 | 2 | 47 | 234 | 239956 | 240143 | Candidatus Nitrospira neomarina strain DK chromosome, complete genome | blastn | 189 | 182 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Candidatus Nitrospira neomarina | ||
| 9723638 | 9723638 | PRJNA799842_P_NODE_72508_length_337_cov_0.875000_g70935_i0 | PRJNA799842 | 72508 | 337 | 0.875 | 2.94875 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 300 | 1.03e-76 | NTclustered | gi|2290906964|gb|CP058931.1| | 70125 | g70935 | i0 | 96.685 | 3.04451038575668 | 181 | 4 | 100 | 2 | 1 | 181 | 317262 | 317084 | MAG: Nitrospira sp. isolate DJ chromosome | blastn | 1026 | 300 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 12272724 | 12272724 | PRJNA799842_P_NODE_136650_length_251_cov_0.865169_g135077_i0 | PRJNA799842 | 136650 | 251 | 0.865169 | 2.17157419 | Nitrospiraceae bacterium | 2026770 | Bacteria | Bacteria | 108 | 4.79e-19 | NTclustered | gi|2108110650|gb|CP070737.1| | 2026770 | g135077 | i0 | 76.923 | 1.84860557768924 | 208 | 36 | 80 | 10 | 39 | 238 | 1517828 | 1517625 | MAG: Nitrospiraceae bacterium isolate bin398 chromosome | blastn | 464 | 108 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospiraceae bacterium | |||
| 12272933 | 12272933 | PRJNA799842_P_NODE_148550_length_249_cov_0.875000_g146977_i0 | PRJNA799842 | 148550 | 249 | 0.875 | 2.17875 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 438 | 1.4799999999999996e-118 | NTclustered | gi|2290906964|gb|CP058931.1| | 70125 | g146977 | i0 | 98.394 | 3 | 249 | 4 | 100 | 0 | 1 | 249 | 2652604 | 2652356 | MAG: Nitrospira sp. isolate DJ chromosome | blastn | 747 | 438 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 12273496 | 12273496 | PRJNA799842_P_NODE_176310_length_243_cov_0.905882_g174737_i0 | PRJNA799842 | 176310 | 243 | 0.905882 | 2.20129326 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 399 | 6.789999999999999e-107 | NTclustered | gi|2290906964|gb|CP058931.1| | 70125 | g174737 | i0 | 96.296 | 5.34979423868313 | 243 | 9 | 100 | 0 | 1 | 243 | 1498828 | 1499070 | MAG: Nitrospira sp. isolate DJ chromosome | blastn | 1300 | 399 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 13972697 | 13972697 | PRJNA799842_P_NODE_135971_length_251_cov_0.865169_g134398_i0 | PRJNA799842 | 135971 | 251 | 0.865169 | 2.17157419 | Nitrospira | 1234 | Bacteria | Bacteria | 424 | 4.18e-114 | NTclustered | gi|2290906964|gb|CP058931.1| | 70125 | g134398 | i0 | 97.2 | 3.35856573705179 | 250 | 7 | 99 | 0 | 2 | 251 | 3186177 | 3186426 | MAG: Nitrospira sp. isolate DJ chromosome | blastn | 843 | 424 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 16096694 | 16096694 | PRJNA799842_P_NODE_180093_length_243_cov_0.905882_g178520_i0 | PRJNA799842 | 180093 | 243 | 0.905882 | 2.20129326 | Candidatus Nitrospira neomarina | 3020899 | Bacteria | Bacteria | 305 | 1.52e-78 | NTclustered | gi|2582130041|gb|CP116968.1| | 3020899 | g178520 | i0 | 90 | 0.987654320987654 | 240 | 18 | 97 | 2 | 7 | 242 | 928017 | 927780 | Candidatus Nitrospira neomarina strain DK chromosome, complete genome | blastn | 240 | 305 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Candidatus Nitrospira neomarina | ||
| 17371810 | 17371810 | PRJNA799842_P_NODE_137574_length_251_cov_0.865169_g136001_i0 | PRJNA799842 | 137574 | 251 | 0.865169 | 2.17157419 | Candidatus Nitrospira neomarina | 3020899 | Bacteria | Bacteria | 359 | 1.2e-94 | NTclustered | gi|2582130041|gb|CP116968.1| | 3020899 | g136001 | i0 | 92.43 | 3 | 251 | 19 | 100 | 0 | 1 | 251 | 402367 | 402117 | Candidatus Nitrospira neomarina strain DK chromosome, complete genome | blastn | 753 | 359 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Candidatus Nitrospira neomarina | ||
| 17372129 | 17372129 | PRJNA799842_P_NODE_155874_length_247_cov_0.885057_g154301_i0 | PRJNA799842 | 155874 | 247 | 0.885057 | 2.18609079 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 350 | 7.07e-92 | NTclustered | gi|2290906964|gb|CP058931.1| | 70125 | g154301 | i0 | 92.623 | 1.96356275303644 | 244 | 17 | 99 | 1 | 4 | 247 | 159758 | 159516 | MAG: Nitrospira sp. isolate DJ chromosome | blastn | 485 | 350 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 17372179 | 17372179 | PRJNA799842_P_NODE_158854_length_247_cov_0.885057_g157281_i0 | PRJNA799842 | 158854 | 247 | 0.885057 | 2.18609079 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 440 | 4.079999999999999e-119 | NTclustered | gi|2290906964|gb|CP058931.1| | 70125 | g157281 | i0 | 98.785 | 3 | 247 | 3 | 100 | 0 | 1 | 247 | 42873 | 42627 | MAG: Nitrospira sp. isolate DJ chromosome | blastn | 741 | 440 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 19920233 | 19920233 | PRJNA799842_P_NODE_138156_length_251_cov_0.865169_g136583_i0 | PRJNA799842 | 138156 | 251 | 0.865169 | 2.17157419 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 204 | 5.93e-48 | NTclustered | gi|1938802452|gb|CP054184.1| | 70125 | g136583 | i0 | 81.275 | 1 | 251 | 47 | 100 | 0 | 1 | 251 | 2279076 | 2278826 | MAG: Nitrospira sp. isolate H3_NOB1 chromosome, complete genome | blastn | 251 | 204 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 21196046 | 21196046 | PRJNA799842_P_NODE_150437_length_248_cov_0.880000_g148864_i0 | PRJNA799842 | 150437 | 248 | 0.88 | 2.1824 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 167 | 7.679999999999999e-37 | NTclustered | gi|2290907019|gb|CP060499.1| | 70125 | g148864 | i0 | 83.333 | 0.838709677419355 | 180 | 30 | 73 | 0 | 66 | 245 | 4179400 | 4179221 | MAG: Nitrospira sp. isolate DH1 chromosome, complete genome | blastn | 208 | 167 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 22470653 | 22470653 | PRJNA799842_P_NODE_148258_length_249_cov_0.875000_g146685_i0 | PRJNA799842 | 148258 | 249 | 0.875 | 2.17875 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 438 | 1.4799999999999996e-118 | NTclustered | gi|2290906964|gb|CP058931.1| | 70125 | g146685 | i0 | 98.394 | 3.00401606425703 | 249 | 4 | 100 | 0 | 1 | 249 | 92172 | 92420 | MAG: Nitrospira sp. isolate DJ chromosome | blastn | 748 | 438 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 22473088 | 22473088 | PRJNA799842_P_NODE_91838_length_303_cov_0.943478_g90265_i0 | PRJNA799842 | 91838 | 303 | 0.943478 | 2.85873834 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 156 | 2.09e-33 | NTclustered | gi|2863125063|dbj|AP038805.1| | 70125 | g90265 | i0 | 80.583 | 1.90759075907591 | 206 | 37 | 67 | 3 | 98 | 301 | 479557 | 479761 | MAG: Nitrospira sp. AFB01 DNA, complete genome | blastn | 578 | 156 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 23746937 | 23746937 | PRJNA799842_P_NODE_182899_length_242_cov_0.911243_g181326_i0 | PRJNA799842 | 182899 | 242 | 0.911243 | 2.20520806 | Candidatus Nitrospira neomarina | 3020899 | Bacteria | Bacteria | 403 | 5.22e-108 | NTclustered | gi|2582130041|gb|CP116968.1| | 3020899 | g181326 | i0 | 96.694 | 3 | 242 | 8 | 100 | 0 | 1 | 242 | 3860788 | 3860547 | Candidatus Nitrospira neomarina strain DK chromosome, complete genome | blastn | 726 | 403 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Candidatus Nitrospira neomarina | ||
| 25445345 | 25445345 | PRJNA799842_P_NODE_117860_length_270_cov_1.167513_g116287_i0 | PRJNA799842 | 117860 | 270 | 1.167513 | 3.1522851 | Nitrospira | 1234 | Bacteria | Bacteria | 460 | 3.4699999999999996e-125 | NTclustered | gi|922305621|gb|CP011801.1| | 42253 | g116287 | i0 | 97.407 | 142.992592592593 | 270 | 7 | 100 | 0 | 1 | 270 | 1279294 | 1279563 | Nitrospira moscoviensis strain NSP M-1, complete genome | blastn | 38608 | 460 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;