RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA799842" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA799842 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2495168 2495168 PRJNA799842_P_NODE_73002_length_335_cov_17.793893_g71429_i0 PRJNA799842 73002 335 17.793893 59.60954155 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 148 3.92e-31   NTclustered gi|2414483|emb|Y00055.1| 5656 g71429 i0 86.567 67.1671641791045 134 18 40 0 109 242 8204 8071 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 22501 148 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
3770472 3770472 PRJNA799842_P_NODE_14343_length_821_cov_1.993316_g13001_i0 PRJNA799842 14343 821 1.993316 16.36512436 Parabodo 140243 Euglenozoa other_Eukaryota 1351 0   NTclustered gi|20331092|gb|AY028450.1| 351713 g13001 i0 96.355 93.2959805115713 823 27 100 3 1 821 1390 569 Bodo caudatus 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 76596 1351 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Parabodonida   Parabodo Parabodo caudatus
5897057 5897057 PRJNA799842_P_NODE_139885_length_250_cov_1.079096_g138312_i0 PRJNA799842 139885 250 1.079096 2.69774 Trypanosoma melophagium 715481 Euglenozoa other_Eukaryota 58.4 4.87e-4   NTclustered gi|2787702987|ref|XM_067336632.1| 715481 g138312 i0 100 0.596 31 0 12 0 127 157 1629 1599 Trypanosoma melophagium uncharacterized protein (LSM04_001586), partial mRNA blastn 149 58.4 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma melophagium
9722840 9722840 PRJNA799842_P_NODE_34808_length_488_cov_1.269880_g33238_i0 PRJNA799842 34808 488 1.26988 6.1970144 Parabodo caudatus 351713 Euglenozoa other_Eukaryota 793 0   NTclustered gi|304227|gb|L19406.1|BODRR24SA 351713 g33238 i0 95.935 151.674180327869 492 15 100 4 1 488 890 400 Bodo caudatus 24S ribosomal RNA large subunit blastn 74017 793 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Parabodonida   Parabodo Parabodo caudatus
10996776 10996776 PRJNA799842_P_NODE_106229_length_283_cov_1.833333_g104656_i0 PRJNA799842 106229 283 1.833333 5.18833239 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 418 2.2399999999999995e-112   NTclustered gi|2026667531|dbj|LC618031.1| 67003 g104656 i0 93.31 162.60777385159 284 18 100 1 1 283 4640 4357 Trypanosoma theileri OSK-16 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, partial and complete sequence blastn 46018 418 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
18647476 18647476 PRJNA799842_P_NODE_93935_length_299_cov_2.384956_g92362_i0 PRJNA799842 93935 299 2.384956 7.13101844 Parabodo caudatus 351713 Euglenozoa other_Eukaryota 553 6.25e-153   NTclustered gi|45739060|gb|AY490218.1| 351713 g92362 i0 100 99.1571906354515 299 0 100 0 1 299 1890 1592 Bodo caudatus 18S ribosomal RNA gene, partial sequence blastn 29648 553 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Parabodonida   Parabodo Parabodo caudatus
21195349 21195349 PRJNA799842_P_NODE_113877_length_274_cov_2.129353_g112304_i0 PRJNA799842 113877 274 2.129353 5.83442722 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 58.4 5.41e-4   NTclustered gi|1624751935|ref|XM_029026896.1| 67003 g112304 i0 90.698 0.62043795620438 43 4 16 0 232 274 1056 1014 Trypanosoma theileri protein kinase (TM35_000202110), partial mRNA blastn 170 58.4 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
21620573 21620573 PRJNA799842_P_NODE_102737_length_287_cov_2.140187_g101164_i0 PRJNA799842 102737 287 2.140187 6.14233669 Kinetoplastea 5653 Euglenozoa other_Eukaryota 525 1.2999999999999995e-144   NTclustered gi|20331092|gb|AY028450.1| 351713 g101164 i0 99.652 92.7247386759582 287 1 100 0 1 287 79 365 Bodo caudatus 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 26612 525 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Parabodonida   Parabodo Parabodo caudatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;