RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA799842" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA799842 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
795255 795255 PRJNA799842_P_NODE_59781_length_368_cov_1.044068_g58208_i0 PRJNA799842 59781 368 1.044068 3.84217024 Lytechinus pictus 7653 Echinodermata other_Eukaryota 54.7 0.01   NTclustered gi|2707420143|ref|XM_064101902.1| 7653 g58208 i0 100 0.078804347826087 29 0 8 0 278 306 796 824 PREDICTED: Lytechinus pictus cytochrome P450 3A9-like (LOC135154702), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
3345885 3345885 PRJNA799842_P_NODE_40603_length_448_cov_1.362667_g39032_i0 PRJNA799842 40603 448 1.362667 6.10474816 Ophiothrix exigua 1815227 Echinodermata other_Eukaryota 802 0   NTclustered gi|2577872914|ref|NC_082173.1| 1815227 g39032 i0 98.889 84.6026785714286 450 3 100 1 1 448 10064 9615 Ophiothrix exigua mitochondrion, complete genome blastn 37902 802 1 Eukaryota Opisthokonta Metazoa Echinodermata Ophiuroidea Amphilepidida Ophiotrichidae Ophiothrix Ophiothrix exigua

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;