contig_metadata
19 rows where analysis = "blastn", bioproject = "PRJNA799842" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 794154 | 794154 | PRJNA799842_P_NODE_179021_length_243_cov_0.905882_g177448_i0 | PRJNA799842 | 179021 | 243 | 0.905882 | 2.20129326 | Leptotrichia buccalis | 40542 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|257048753|gb|CP001685.1| | 523794 | g177448 | i0 | 100 | 5.06584362139918 | 243 | 0 | 100 | 0 | 1 | 243 | 1502292 | 1502534 | Leptotrichia buccalis DSM 1135, complete genome | blastn | 1231 | 449 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 2069919 | 2069919 | PRJNA799842_P_NODE_176942_length_243_cov_0.905882_g175369_i0 | PRJNA799842 | 176942 | 243 | 0.905882 | 2.20129326 | Leptotrichia sp. HMT-225 | 3058373 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|2557559843|gb|CP130323.1| | 3058373 | g175369 | i0 | 100 | 22.0740740740741 | 243 | 0 | 100 | 0 | 1 | 243 | 240996 | 241238 | Leptotrichia sp. HMT-225 chromosome, complete genome | blastn | 5364 | 449 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. HMT-225 | ||
| 2494554 | 2494554 | PRJNA799842_P_NODE_190542_length_241_cov_0.880952_g188969_i0 | PRJNA799842 | 190542 | 241 | 0.880952 | 2.12309432 | Fusobacterium | 848 | Bacteria | Bacteria | 440 | 3.959999999999999e-119 | NTclustered | gi|2318938525|gb|CP107203.1| | 856 | g188969 | i0 | 99.585 | 9.16182572614108 | 241 | 1 | 100 | 0 | 1 | 241 | 2844850 | 2845090 | MAG: Fusobacterium varium isolate KR001_HAM_0062 chromosome, complete genome | blastn | 2208 | 440 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium varium | ||
| 2494556 | 2494556 | PRJNA799842_P_NODE_190762_length_239_cov_2.024096_g189189_i0 | PRJNA799842 | 190762 | 239 | 2.024096 | 4.83758944 | Leptotrichia | 32067 | Bacteria | Bacteria | 396 | 8.609999999999997e-106 | NTclustered | gi|470484715|ref|NR_076664.1| | 40542 | g189189 | i0 | 96.653 | 234.648535564854 | 239 | 7 | 100 | 1 | 1 | 239 | 258 | 21 | Leptotrichia buccalis strain C-1013-b 23S ribosomal RNA gene, complete sequence | blastn | 56081 | 396 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 3345615 | 3345615 | PRJNA799842_P_NODE_28243_length_550_cov_2.188679_g26685_i0 | PRJNA799842 | 28243 | 550 | 2.188679 | 12.0377345 | Leptotrichia hofstadii | 157688 | Bacteria | Bacteria | 983 | 0 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g26685 | i0 | 98.909 | 485.34 | 550 | 6 | 100 | 0 | 1 | 550 | 2373144 | 2373693 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 266937 | 983 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii | ||
| 3770177 | 3770177 | PRJNA799842_P_NODE_103543_length_286_cov_3.267606_g101970_i0 | PRJNA799842 | 103543 | 286 | 3.267606 | 9.34535316 | Fusobacterium | 848 | Bacteria | Bacteria | 183 | 8.98e-42 | NTclustered | gi|2444100754|gb|CP117525.1| | 851 | g101970 | i0 | 88.312 | 17.2202797202797 | 154 | 16 | 53 | 2 | 134 | 286 | 189499 | 189347 | Fusobacterium nucleatum strain FNV chromosome, complete genome | blastn | 4925 | 183 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 4621269 | 4621269 | PRJNA799842_P_NODE_112084_length_277_cov_0.941176_g110511_i0 | PRJNA799842 | 112084 | 277 | 0.941176 | 2.60705752 | Fusobacterium varium | 856 | Bacteria | Bacteria | 422 | 1.69e-113 | NTclustered | gi|1540073569|emb|LR134390.1| | 856 | g110511 | i0 | 94.265 | 492.241877256318 | 279 | 10 | 99 | 6 | 2 | 277 | 514428 | 514153 | Fusobacterium varium strain NCTC10560 genome assembly, chromosome: 1 | blastn | 136351 | 422 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium varium | ||
| 4624289 | 4624289 | PRJNA799842_P_NODE_86944_length_310_cov_2.776371_g85371_i0 | PRJNA799842 | 86944 | 310 | 2.776371 | 8.6067501 | Fusobacterium pseudoperiodonticum | 2663009 | Bacteria | Bacteria | 278 | 4.39e-70 | NTclustered | gi|1276714546|gb|CP024702.1| | 2663009 | g85371 | i0 | 100 | 34.7483870967742 | 150 | 0 | 97 | 0 | 1 | 150 | 1632848 | 1632699 | Fusobacterium pseudoperiodonticum strain KCOM 1282 chromosome, complete genome | blastn | 10772 | 278 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium pseudoperiodonticum | ||
| 5898775 | 5898775 | PRJNA799842_P_NODE_57605_length_374_cov_2.129568_g56032_i0 | PRJNA799842 | 57605 | 374 | 2.129568 | 7.96458432 | Fusobacterium nucleatum | 851 | Bacteria | Bacteria | 52.8 | 0.036 | NTclustered | gi|2704972056|gb|CP077127.1| | 851 | g56032 | i0 | 100 | 0.149732620320856 | 28 | 0 | 7 | 0 | 52 | 79 | 1472586 | 1472613 | Fusobacterium nucleatum strain KCOM3503 chromosome, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 7171937 | 7171937 | PRJNA799842_P_NODE_150226_length_248_cov_0.880000_g148653_i0 | PRJNA799842 | 150226 | 248 | 0.88 | 2.1824 | Fusobacterium animalis | 76859 | Bacteria | Bacteria | 459 | 1.13e-124 | NTclustered | gi|2078823552|gb|CP071098.1| | 76859 | g148653 | i0 | 100 | 2768.54435483871 | 248 | 0 | 100 | 0 | 1 | 248 | 600141 | 600388 | Fusobacterium animalis strain THCT6B3 chromosome, complete genome | blastn | 686599 | 459 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium animalis | ||
| 12698433 | 12698433 | PRJNA799842_P_NODE_158010_length_247_cov_0.885057_g156437_i0 | PRJNA799842 | 158010 | 247 | 0.885057 | 2.18609079 | Fusobacterium | 848 | Bacteria | Bacteria | 457 | 4.05e-124 | NTclustered | gi|2444100754|gb|CP117525.1| | 851 | g156437 | i0 | 100 | 100 | 247 | 0 | 100 | 0 | 1 | 247 | 956109 | 956355 | Fusobacterium nucleatum strain FNV chromosome, complete genome | blastn | 24700 | 457 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 14823869 | 14823869 | PRJNA799842_P_NODE_72092_length_337_cov_3.295455_g70519_i0 | PRJNA799842 | 72092 | 337 | 3.295455 | 11.10568335 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 556 | 5.529999999999999e-154 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g70519 | i0 | 96.439 | 297.204747774481 | 337 | 12 | 100 | 0 | 1 | 337 | 53151 | 52815 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 100158 | 556 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 15247554 | 15247554 | PRJNA799842_P_NODE_34252_length_492_cov_3.016706_g32682_i0 | PRJNA799842 | 34252 | 492 | 3.016706 | 14.84219352 | Leptotrichia | 32067 | Bacteria | Bacteria | 898 | 0 | NTclustered | gi|470484715|ref|NR_076664.1| | 40542 | g32682 | i0 | 99.593 | 462.477642276423 | 492 | 2 | 100 | 0 | 1 | 492 | 393 | 884 | Leptotrichia buccalis strain C-1013-b 23S ribosomal RNA gene, complete sequence | blastn | 227539 | 904 | 0.993362831858407 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 16098138 | 16098138 | PRJNA799842_P_NODE_76733_length_328_cov_1.368627_g75160_i0 | PRJNA799842 | 76733 | 328 | 1.368627 | 4.48909656 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 52.8 | 0.031 | NTclustered | gi|1708582457|dbj|AP019841.1| | 157687 | g75160 | i0 | 100 | 0.0853658536585366 | 28 | 0 | 9 | 0 | 163 | 190 | 893595 | 893622 | Leptotrichia wadei JMUB3936 DNA, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 19071547 | 19071547 | PRJNA799842_P_NODE_93095_length_301_cov_1.004386_g91522_i0 | PRJNA799842 | 93095 | 301 | 1.004386 | 3.02320186 | Fusobacterium | 848 | Bacteria | Bacteria | 52.8 | 0.028 | NTclustered | gi|2705015041|gb|CP084068.1| | 856 | g91522 | i0 | 100 | 0.372093023255814 | 28 | 0 | 9 | 0 | 73 | 100 | 614237 | 614264 | Fusobacterium varium strain SB064 chromosome, complete genome | blastn | 112 | 52.8 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium varium | ||
| 21196563 | 21196563 | PRJNA799842_P_NODE_178837_length_243_cov_0.905882_g177264_i0 | PRJNA799842 | 178837 | 243 | 0.905882 | 2.20129326 | Fusobacterium ulcerans | 861 | Bacteria | Bacteria | 416 | 6.739999999999998e-112 | NTclustered | gi|1370545701|gb|CP028105.1| | 861 | g177264 | i0 | 97.531 | 10.0617283950617 | 243 | 6 | 100 | 0 | 1 | 243 | 3422462 | 3422704 | Fusobacterium ulcerans strain ATCC 49185 chromosome, complete genome | blastn | 2445 | 416 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium ulcerans | ||
| 22470252 | 22470252 | PRJNA799842_P_NODE_125158_length_261_cov_1.638298_g123585_i0 | PRJNA799842 | 125158 | 261 | 1.638298 | 4.27595778 | Leptotrichia buccalis | 40542 | Bacteria | Bacteria | 483 | 7.12e-132 | NTclustered | gi|257048753|gb|CP001685.1| | 523794 | g123585 | i0 | 100 | 4.97701149425287 | 261 | 0 | 100 | 0 | 1 | 261 | 338870 | 338610 | Leptotrichia buccalis DSM 1135, complete genome | blastn | 1299 | 483 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 23747446 | 23747446 | PRJNA799842_P_NODE_34399_length_491_cov_1.758373_g32829_i0 | PRJNA799842 | 34399 | 491 | 1.758373 | 8.63361143 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 691 | 0 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g32829 | i0 | 92.261 | 104.193482688391 | 491 | 33 | 99 | 5 | 1 | 489 | 52036 | 51549 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 51159 | 691 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 25445950 | 25445950 | PRJNA799842_P_NODE_36160_length_477_cov_2.551980_g34590_i0 | PRJNA799842 | 36160 | 477 | 2.55198 | 12.1729446 | Fusobacteriaceae | 203492 | Bacteria | Bacteria | 752 | 0 | NTclustered | gi|2705015041|gb|CP084068.1| | 856 | g34590 | i0 | 95.359 | 511.316561844864 | 474 | 21 | 99 | 1 | 1 | 474 | 769917 | 770389 | Fusobacterium varium strain SB064 chromosome, complete genome | blastn | 243898 | 754 | 0.997347480106101 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium varium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;