RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA799842" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA799842 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2069938 2069938 PRJNA799842_P_NODE_177802_length_243_cov_0.905882_g176229_i0 PRJNA799842 177802 243 0.905882 2.20129326 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 340 4.169999999999999e-89   NTclustered gi|1419285073|gb|CP030759.1| 2250252 g176229 i0 92.827 321.222222222222 237 14 97 3 8 243 161894 161660 Candidatus Sumerlaea chitinivorans isolate BY40 chromosome, complete genome blastn 78057 340 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans
13546943 13546943 PRJNA799842_P_NODE_135011_length_251_cov_0.865169_g133438_i0 PRJNA799842 135011 251 0.865169 2.17157419 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 78.7 3.75e-10   NTclustered gi|2258868658|gb|CP060229.1| 2052152 g133438 i0 95.833 0.191235059760956 48 2 19 0 194 241 497972 498019 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-25 chromosome blastn 48 78.7 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
14821878 14821878 PRJNA799842_P_NODE_143452_length_250_cov_0.870056_g141879_i0 PRJNA799842 143452 250 0.870056 2.17514 Candidatus Minimicrobia vallesae 2841264 Bacteria Bacteria 383 7.07e-102   NTclustered gi|2052594292|gb|CP076459.1| 2841264 g141879 i0 94.378 7.96 249 14 99 0 1 249 648893 648645 Candidatus Minimicrobia vallesae isolate IHU2 chromosome, complete genome blastn 1990 383 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota       Candidatus Minimicrobia Candidatus Minimicrobia vallesae
18644802 18644802 PRJNA799842_P_NODE_132835_length_253_cov_1.250000_g131262_i0 PRJNA799842 132835 253 1.25 3.1625 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 58.4 4.93e-4   NTclustered gi|2107803655|gb|CP070825.1| 2052149 g131262 i0 97.059 4.09486166007905 34 1 13 0 168 201 1917884 1917851 MAG: Candidatus Aminicenantes bacterium isolate bin112 chromosome blastn 1036 58.4 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;