RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA798905" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA798905 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5046175 5046175 PRJNA798905_S_NODE_12504_length_400_cov_4.241590_g12055_i0 PRJNA798905 12504 400 4.24159 16.96636 Heterosporis 157917 Fungi Fungi 551 3.0999999999999986e-152   NTclustered gi|448278452|gb|KC137548.1| 1289055 g12055 i0 91.542 33.51 402 30 100 3 1 400 3560 3161 Heterosporis sp. NBDP-2013a isolate MN/WAE small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13404 551 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis sp. NBDP-2013a
11422083 11422083 PRJNA798905_S_NODE_29869_length_276_cov_5.512315_g29420_i0 PRJNA798905 29869 276 5.512315 15.213989400000001 Heterosporis 157917 Fungi Fungi 313 1.05e-80   NTclustered gi|27448231|gb|AF387331.1| 184033 g29420 i0 88.976 29.6376811594203 254 26 91 1 22 273 2047 2300 Heterosporis anguillarum small subunit ribosomal RNA gene, internal transcribed spacer, and large subunit ribosomal RNA gene, complete sequence blastn 8180 313 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis anguillarum
21194943 21194943 PRJNA798905_S_NODE_6477_length_524_cov_19.064302_g6028_i0 PRJNA798905 6477 524 19.064302 99.89694248 Pseudoloma neurophilia 146866 Fungi Fungi 905 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g6028 i0 99.797 93.5362595419847 492 1 100 0 1 492 796 305 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 49013 905 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
21620306 21620306 PRJNA798905_S_NODE_28977_length_281_cov_1.451923_g28528_i0 PRJNA798905 28977 281 1.451923 4.07990363 Pleistophoridae 35232 Fungi Fungi 333 8.259999999999999e-87   NTclustered gi|134147422|gb|EF119339.1| 249366 g28528 i0 88.07 53.2526690391459 285 28 100 5 1 281 1968 1686 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 14964 333 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;