contig_metadata
14 rows where analysis = "blastn", bioproject = "PRJNA798905" and tax_phylum = "Campylobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2493664 | 2493664 | PRJNA798905_S_NODE_29122_length_280_cov_2.850242_g28673_i0 | PRJNA798905 | 29122 | 280 | 2.850242 | 7.9806776 | Aliarcobacter | 2321111 | Bacteria | Bacteria | 490 | 4.61e-134 | NTclustered | gi|1704610973|gb|CP041386.1| | 28197 | g28673 | i0 | 98.214 | 49.3214285714286 | 280 | 5 | 100 | 0 | 1 | 280 | 1107649 | 1107928 | Aliarcobacter butzleri strain ED-1 chromosome, complete genome | blastn | 13810 | 490 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Aliarcobacter | Aliarcobacter butzleri | ||
| 5895612 | 5895612 | PRJNA798905_S_NODE_2985_length_778_cov_10.697872_g2577_i0 | PRJNA798905 | 2985 | 778 | 10.697872 | 83.22944416 | Malaciobacter canalis | 1912871 | Bacteria | Bacteria | 676 | 0 | NTclustered | gi|1724553138|gb|CP042812.1| | 1912871 | g2577 | i0 | 96.359 | 2.24678663239075 | 412 | 14 | 100 | 1 | 1 | 411 | 123525 | 123936 | Malaciobacter canalis strain LMG 29148 chromosome, complete genome | blastn | 1748 | 676 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Malaciobacter | Malaciobacter canalis | ||
| 7169933 | 7169933 | PRJNA798905_S_NODE_10266_length_432_cov_5.693593_g9817_i0 | PRJNA798905 | 10266 | 432 | 5.693593 | 24.59632176 | Arcobacter suis | 1278212 | Bacteria | Bacteria | 420 | 9.92e-113 | NTclustered | gi|1474790806|gb|CP032100.1| | 663365 | g9817 | i0 | 99.142 | 0.951388888888889 | 233 | 2 | 94 | 0 | 13 | 245 | 2512239 | 2512471 | Arcobacter suis CECT 7833 chromosome, complete genome | blastn | 411 | 420 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter suis | ||
| 7170446 | 7170446 | PRJNA798905_S_NODE_31006_length_271_cov_3.924242_g30557_i0 | PRJNA798905 | 31006 | 271 | 3.924242 | 10.63469582 | Arcobacter suis | 1278212 | Bacteria | Bacteria | 496 | 9.55e-136 | NTclustered | gi|1474790806|gb|CP032100.1| | 663365 | g30557 | i0 | 99.631 | 15 | 271 | 1 | 100 | 0 | 1 | 271 | 2477114 | 2476844 | Arcobacter suis CECT 7833 chromosome, complete genome | blastn | 4065 | 496 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter suis | ||
| 8445361 | 8445361 | PRJNA798905_S_NODE_39047_length_243_cov_1.594118_g38598_i0 | PRJNA798905 | 39047 | 243 | 1.594118 | 3.87370674 | Malaciobacter marinus | 505249 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|1474785413|gb|CP032101.1| | 505249 | g38598 | i0 | 100 | 0.11522633744856 | 28 | 0 | 12 | 0 | 96 | 123 | 1771318 | 1771291 | Malaciobacter marinus strain JCM 15502 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Malaciobacter | Malaciobacter marinus | ||
| 10996027 | 10996027 | PRJNA798905_S_NODE_27589_length_288_cov_1.358140_g27140_i0 | PRJNA798905 | 27589 | 288 | 1.35814 | 3.9114432 | Arcobacter suis | 1278212 | Bacteria | Bacteria | 411 | 3.819999999999999e-110 | NTclustered | gi|1474790806|gb|CP032100.1| | 663365 | g27140 | i0 | 95.367 | 0.899305555555556 | 259 | 11 | 90 | 1 | 26 | 284 | 487700 | 487957 | Arcobacter suis CECT 7833 chromosome, complete genome | blastn | 259 | 411 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter suis | ||
| 12271475 | 12271475 | PRJNA798905_S_NODE_30970_length_271_cov_6.505051_g30521_i0 | PRJNA798905 | 30970 | 271 | 6.505051 | 17.62868821 | Aliarcobacter butzleri | 28197 | Bacteria | Bacteria | 468 | 2.08e-127 | NTclustered | gi|1672832549|gb|CP040507.1| | 888827 | g30521 | i0 | 97.786 | 58.3468634686347 | 271 | 6 | 100 | 0 | 1 | 271 | 69060 | 69330 | Aliarcobacter butzleri JV22 chromosome, complete genome | blastn | 15812 | 468 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Aliarcobacter | Aliarcobacter butzleri | ||
| 13546047 | 13546047 | PRJNA798905_S_NODE_5751_length_557_cov_3.615702_g5304_i0 | PRJNA798905 | 5751 | 557 | 3.615702 | 20.13946014 | Arcobacter defluvii | 873191 | Bacteria | Bacteria | 158 | 1.13e-33 | NTclustered | gi|1847331607|gb|CP053835.1| | 873191 | g5304 | i0 | 95.918 | 1.88689407540395 | 98 | 3 | 17 | 1 | 407 | 503 | 1290412 | 1290315 | Arcobacter defluvii strain LMG 25694 chromosome, complete genome | blastn | 1051 | 158 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter defluvii | ||
| 17370435 | 17370435 | PRJNA798905_S_NODE_26974_length_291_cov_2.119266_g26525_i0 | PRJNA798905 | 26974 | 291 | 2.119266 | 6.16706406 | Arcobacter suis | 1278212 | Bacteria | Bacteria | 128 | 4.35e-25 | NTclustered | gi|1474790806|gb|CP032100.1| | 663365 | g26525 | i0 | 98.63 | 0.491408934707904 | 73 | 0 | 48 | 1 | 165 | 236 | 2581621 | 2581693 | Arcobacter suis CECT 7833 chromosome, complete genome | blastn | 143 | 128 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter suis | ||
| 17370770 | 17370770 | PRJNA798905_S_NODE_41294_length_234_cov_2.739130_g40845_i0 | PRJNA798905 | 41294 | 234 | 2.73913 | 6.4095642 | Malaciobacter mytili | 603050 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|1435908220|gb|CP031219.1| | 1032238 | g40845 | i0 | 100 | 0.123931623931624 | 29 | 0 | 12 | 0 | 154 | 182 | 2394386 | 2394358 | Malaciobacter mytili LMG 24559 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Malaciobacter | Malaciobacter mytili | ||
| 17370822 | 17370822 | PRJNA798905_S_NODE_43394_length_221_cov_4.925676_g42945_i0 | PRJNA798905 | 43394 | 221 | 4.925676 | 10.88574396 | Arcobacter defluvii | 873191 | Bacteria | Bacteria | 398 | 2.1799999999999995e-106 | NTclustered | gi|1847331607|gb|CP053835.1| | 873191 | g42945 | i0 | 99.095 | 20.9276018099548 | 221 | 2 | 100 | 0 | 1 | 221 | 462298 | 462518 | Arcobacter defluvii strain LMG 25694 chromosome, complete genome | blastn | 4625 | 398 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter defluvii | ||
| 19918865 | 19918865 | PRJNA798905_S_NODE_28476_length_283_cov_3.623810_g28027_i0 | PRJNA798905 | 28476 | 283 | 3.62381 | 10.2553823 | Arcobacter suis | 1278212 | Bacteria | Bacteria | 490 | 4.67e-134 | NTclustered | gi|1474790806|gb|CP032100.1| | 663365 | g28027 | i0 | 97.88 | 2.97173144876325 | 283 | 6 | 100 | 0 | 1 | 283 | 105359 | 105641 | Arcobacter suis CECT 7833 chromosome, complete genome | blastn | 841 | 490 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter suis | ||
| 20344550 | 20344550 | PRJNA798905_S_NODE_19236_length_338_cov_2.113208_g18787_i0 | PRJNA798905 | 19236 | 338 | 2.113208 | 7.14264304 | Arcobacter | 28196 | Bacteria | Bacteria | 603 | 7.019999999999999e-168 | NTclustered | gi|1847331607|gb|CP053835.1| | 873191 | g18787 | i0 | 98.817 | 47.9556213017751 | 338 | 4 | 100 | 0 | 1 | 338 | 2781426 | 2781763 | Arcobacter defluvii strain LMG 25694 chromosome, complete genome | blastn | 16209 | 603 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter defluvii | ||
| 20344577 | 20344577 | PRJNA798905_S_NODE_21736_length_321_cov_2.665323_g21287_i0 | PRJNA798905 | 21736 | 321 | 2.665323 | 8.55568683 | Bacteria | 2 | Bacteria | Bacteria | 588 | 1.8599999999999994e-163 | NTclustered | gi|2323232558|gb|CP109813.1| | 195 | g21287 | i0 | 99.688 | 383.311526479751 | 321 | 1 | 100 | 0 | 1 | 321 | 554405 | 554085 | Campylobacter coli strain CC20JX12 chromosome, complete genome | blastn | 123043 | 588 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;