RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA798905" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA798905 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1218048 1218048 PRJNA798905_S_NODE_24181_length_306_cov_3.085837_g23732_i0 PRJNA798905 24181 306 3.085837 9.44266122 Ascomycota 4890 Fungi Fungi 516 8.42e-142   NTclustered gi|767813157|gb|KP114602.1| 29917 g23732 i0 99.647 92.483660130719 283 0 92 1 1 283 4 285 Cladosporium cladosporioides strain PF3 large subunit ribosomal RNA gene, partial sequence blastn 28300 516 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
12697701 12697701 PRJNA798905_S_NODE_22530_length_316_cov_2.913580_g22081_i0 PRJNA798905 22530 316 2.91358 9.2069128 root 1 Root_unresolved Root_unresolved 573 5.109999999999998e-159   NTclustered gi|1280049812|gb|MF072571.1| 29917 g22081 i0 99.369 100.316455696203 317 0 100 2 1 316 625 940 Cladosporium cladosporioides strain 007 small subunit ribosomal RNA gene, partial sequence blastn 31700 573 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
23744833 23744833 PRJNA798905_S_NODE_29919_length_276_cov_3.330049_g29470_i0 PRJNA798905 29919 276 3.330049 9.19093524 Cladosporium anthropophilum 1970646 Fungi Fungi 510 3.48e-140   NTclustered gi|2216737164|ref|NC_061970.1| 1970646 g29470 i0 100 24.3442028985507 276 0 100 0 1 276 33764 33489 Cladosporium anthropophilum voucher KACC 49782 mitochondrion, complete genome blastn 6719 510 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium anthropophilum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;