contig_metadata
8 rows where analysis = "blastn", bioproject = "PRJNA798905" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2068062 | 2068062 | PRJNA798905_S_NODE_36542_length_249_cov_1.750000_g36093_i0 | PRJNA798905 | 36542 | 249 | 1.75 | 4.3575 | Kribbella sp. CA-293567 | 3002436 | Bacteria | Bacteria | 62.1 | 3.74e-5 | NTclustered | gi|2425436797|gb|CP114065.1| | 3002436 | g36093 | i0 | 100 | 22.8072289156627 | 33 | 0 | 13 | 0 | 163 | 195 | 3580468 | 3580500 | Kribbella sp. CA-293567 chromosome, complete genome | blastn | 5679 | 62.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Kribbellaceae | Kribbella | Kribbella sp. CA-293567 | ||
| 4620892 | 4620892 | PRJNA798905_S_NODE_7584_length_488_cov_5.125301_g7135_i0 | PRJNA798905 | 7584 | 488 | 5.125301 | 25.01146888 | Tsukamurella tyrosinosolvens | 57704 | Bacteria | Bacteria | 701 | 0 | NTclustered | gi|2459075662|gb|CP119372.1| | 57704 | g7135 | i0 | 92.638 | 8.99180327868852 | 489 | 32 | 99 | 4 | 1 | 487 | 1448357 | 1447871 | Tsukamurella tyrosinosolvens strain NAN1 chromosome | blastn | 4388 | 701 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Tsukamurellaceae | Tsukamurella | Tsukamurella tyrosinosolvens | ||
| 11422192 | 11422192 | PRJNA798905_S_NODE_40629_length_237_cov_5.853659_g40180_i0 | PRJNA798905 | 40629 | 237 | 5.853659 | 13.87317183 | Bacteria | 2 | Bacteria | Bacteria | 250 | 7.0299999999999995e-62 | NTclustered | gi|1418363025|gb|CP030287.1| | 2099583 | g40180 | i0 | 85.654 | 2 | 237 | 34 | 100 | 0 | 1 | 237 | 8618876 | 8619112 | Streptomyces sp. ICC1 chromosome | blastn | 474 | 250 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. ICC1 | ||
| 17370792 | 17370792 | PRJNA798905_S_NODE_42154_length_230_cov_2.286624_g41705_i0 | PRJNA798905 | 42154 | 230 | 2.286624 | 5.2592352 | Micrococcus luteus | 1270 | Bacteria | Bacteria | 303 | 5.13e-78 | NTclustered | gi|1875928653|gb|CP059046.1| | 1270 | g41705 | i0 | 90.476 | 2.5304347826087 | 231 | 20 | 100 | 2 | 1 | 230 | 75270 | 75499 | Micrococcus luteus strain R17 chromosome, complete genome | blastn | 582 | 303 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus luteus | ||
| 22468881 | 22468881 | PRJNA798905_S_NODE_17218_length_354_cov_1.900356_g16769_i0 | PRJNA798905 | 17218 | 354 | 1.900356 | 6.72726024 | Corynebacterium minutissimum | 38301 | Bacteria | Bacteria | 597 | 3.43e-166 | NTclustered | gi|1986087704|gb|CP069533.1| | 38301 | g16769 | i0 | 97.708 | 360.579096045198 | 349 | 4 | 98 | 2 | 1 | 347 | 1163920 | 1163574 | Corynebacterium minutissimum strain FDAARGOS_1196 chromosome, complete genome | blastn | 127645 | 597 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium minutissimum | ||
| 22469670 | 22469670 | PRJNA798905_S_NODE_9358_length_447_cov_11.160428_g8909_i0 | PRJNA798905 | 9358 | 447 | 11.160428 | 49.88711316 | Nocardioides terrisoli | 3388267 | Bacteria | Bacteria | 669 | 0 | NTclustered | gi|2579173395|gb|CP134227.1| | 3388267 | g8909 | i0 | 96.333 | 215.391498881432 | 409 | 11 | 91 | 4 | 1 | 407 | 390947 | 390541 | Nocardioides terrisoli strain YR1 chromosome, complete genome | blastn | 96280 | 669 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Nocardioides | Nocardioides terrisoli | ||
| 22895751 | 22895751 | PRJNA798905_S_NODE_26898_length_291_cov_4.458716_g26449_i0 | PRJNA798905 | 26898 | 291 | 4.458716 | 12.97486356 | Bacteria | 2 | Bacteria | Bacteria | 538 | 1.6999999999999994e-148 | NTclustered | gi|1418363025|gb|CP030287.1| | 2099583 | g26449 | i0 | 100 | 5.28178694158076 | 291 | 0 | 100 | 0 | 1 | 291 | 8619339 | 8619629 | Streptomyces sp. ICC1 chromosome | blastn | 1537 | 538 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. ICC1 | ||
| 24169965 | 24169965 | PRJNA798905_S_NODE_40579_length_238_cov_2.296970_g40130_i0 | PRJNA798905 | 40579 | 238 | 2.29697 | 5.4667886 | Corynebacterium | 1716 | Bacteria | Bacteria | 359 | 1.12e-94 | NTclustered | gi|2099489108|gb|CP083646.1| | 108486 | g40130 | i0 | 94.068 | 2.96218487394958 | 236 | 14 | 99 | 0 | 3 | 238 | 2650745 | 2650980 | Corynebacterium falsenii strain FDAARGOS_1494 chromosome, complete genome | blastn | 705 | 359 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium falsenii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;