RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA798905" and tax_kingdom = "Loebvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 3 ✖

bioproject 1

  • PRJNA798905 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9720092 9720092 PRJNA798905_S_NODE_24148_length_306_cov_4.257511_g23699_i0 PRJNA798905 24148 306 4.257511 13.02798366 Inoviridae sp. 2219103 Viruses Viruses 488 1.8399999999999996e-133   NTclustered gi|2906156266|gb|PQ646933.1| 2219103 g23699 i0 95.425 1 306 14 100 0 1 306 2717 2412 MAG: Inoviridae sp. isolate k127_428231 genomic sequence blastn 306 488 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
19919294 19919294 PRJNA798905_S_NODE_6056_length_543_cov_6.170213_g5608_i0 PRJNA798905 6056 543 6.170213 33.50425659 Inoviridae sp. 2219103 Viruses Viruses 937 0   NTclustered gi|2906156266|gb|PQ646933.1| 2219103 g5608 i0 97.79 3.3683241252302 543 12 100 0 1 543 1051 1593 MAG: Inoviridae sp. isolate k127_428231 genomic sequence blastn 1829 937 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
23744552 23744552 PRJNA798905_S_NODE_17759_length_349_cov_5.913043_g17310_i0 PRJNA798905 17759 349 5.913043 20.63652007 Inoviridae sp. 2219103 Viruses Viruses 303 8.24e-78   NTclustered gi|2906156266|gb|PQ646933.1| 2219103 g17310 i0 83.434 0.951289398280802 332 50 94 5 21 349 3479 3150 MAG: Inoviridae sp. isolate k127_428231 genomic sequence blastn 332 303 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;