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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA798511" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA798511 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13544884 13544884 PRJNA798511_P_NODE_98891_length_244_cov_0.900585_g94625_i0 PRJNA798511 98891 244 0.900585 2.1974274 Vulcanisaeta moutnovskia 985052 Archaea Archaea 52.8 0.022   NTclustered gi|323706731|gb|CP002529.1| 985053 g94625 i0 100 0.114754098360656 28 0 11 0 75 102 336127 336100 Vulcanisaeta moutnovskia 768-28, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta moutnovskia
15246123 15246123 PRJNA798511_P_NODE_28332_length_567_cov_1.232794_g24107_i0 PRJNA798511 28332 567 1.232794 6.98994198 Archaea 2157 Archaea Archaea 54.7 0.016   NTclustered gi|765560211|gb|KP308712.1| 115547 g24107 i0 100 0.153439153439153 29 0 5 0 436 464 184681 184653 Uncultured archaeon clone gwa2_scaffold_75 genomic sequence blastn 87 54.7 1 Archaea               uncultured archaeon
18642765 18642765 PRJNA798511_P_NODE_94495_length_247_cov_0.885057_g90229_i0 PRJNA798511 94495 247 0.885057 2.18609079 Methanosarcina sp. MTP4 1434100 Archaea Archaea 52.8 0.022   NTclustered gi|805342629|gb|CP009505.1| 1434100 g90229 i0 100 0.11336032388664 28 0 11 0 15 42 1786294 1786267 Methanosarcina sp. MTP4, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp. MTP4
22467765 22467765 PRJNA798511_P_NODE_55118_length_335_cov_0.881679_g50852_i0 PRJNA798511 55118 335 0.881679 2.95362465 uncultured archaeon 115547 Archaea Archaea 54.7 0.009   NTclustered gi|1591441181|gb|MK005738.1| 115547 g50852 i0 96.875 0.0955223880597015 32 1 10 0 238 269 11540 11571 Uncultured archaeon clone rifcsplowo2_01_282_cur blastn 32 54.7 1 Archaea               uncultured archaeon
25016881 25016881 PRJNA798511_P_NODE_38900_length_430_cov_2.394958_g34638_i0 PRJNA798511 38900 430 2.394958 10.2983194 Nitrosotalea devaniterrae 1078905 Archaea Archaea 52.8 0.041   NTclustered gi|1003583480|emb|LN890280.1| 1078905 g34638 i0 94.118 0.0790697674418605 34 2 8 0 260 293 996827 996860 Candidatus Nitrosotalea devanaterra genome assembly, chromosome: 1 blastn 34 52.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosotaleales Nitrosotaleaceae Nitrosotalea Nitrosotalea devaniterrae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;