RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA798511" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA798511 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2066085 2066085 PRJNA798511_P_NODE_31982_length_509_cov_1.206422_g27732_i0 PRJNA798511 31982 509 1.206422 6.14068798 Amanita sp. CQC-2022a 2984036 Fungi Fungi 52.8 0.05   NTclustered gi|2513212536|gb|ON556618.1| 2984036 g27732 i0 87.5 0.18860510805501 48 2 9 3 345 389 58087 58041 Amanita sp. CQC-2022a voucher GNHR-430 mitochondrion, complete genome blastn 96 52.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Amanitaceae Amanita Amanita sp. CQC-2022a
7168332 7168332 PRJNA798511_P_NODE_20886_length_768_cov_4.230216_g1010_i1 PRJNA798511 20886 768 4.230216 32.48805888 Lactarius trivialis 217427 Fungi Fungi 54.7 0.021   NTclustered gi|2091527986|ref|NC_057510.1| 217427 g1010 i1 96.97 0.04296875 33 0 4 1 503 535 40338 40307 Lactarius trivialis mitochondrion, complete genome blastn 33 54.7 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Russulales Russulaceae Lactarius Lactarius trivialis
10994866 10994866 PRJNA798511_P_NODE_66549_length_298_cov_1.368889_g62283_i0 PRJNA798511 66549 298 1.368889 4.07928922 Lentinula edodes 5353 Fungi Fungi 52.8 0.028   NTclustered gi|2185515908|ref|XM_046236439.1| 5353 g62283 i0 100 0.0939597315436242 28 0 9 0 225 252 86 113 Lentinula edodes uncharacterized protein (C8R40DRAFT_848008), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Omphalotaceae Lentinula Lentinula edodes
25017439 25017439 PRJNA798511_P_NODE_73500_length_281_cov_1.110577_g69234_i0 PRJNA798511 73500 281 1.110577 3.12072137 Hemileia vastatrix 203904 Fungi Fungi 54.7 0.007   NTclustered gi|326374591|gb|JF288624.1| 203904 g69234 i0 100 0.103202846975089 29 0 10 0 250 278 2811 2783 Hemileia vastatrix microsatellite Hva01488 sequence blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Zaghouaniaceae Hemileia Hemileia vastatrix

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;