RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA798511" and tax_clade = "ant, tsetse, mealybug, aphid, etc. endosymbionts"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • ant, tsetse, mealybug, aphid, etc. endosymbionts · 3 ✖

bioproject 1

  • PRJNA798511 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2066935 2066935 PRJNA798511_P_NODE_84322_length_258_cov_1.248649_g80056_i0 PRJNA798511 84322 258 1.248649 3.22151442 Candidatus Stammera capleta 2608262 Bacteria Bacteria 54.7 0.007   NTclustered gi|2676815311|gb|CP144782.1| 2608262 g80056 i0 100 0.112403100775194 29 0 11 0 193 221 225895 225923 MAG: Candidatus Stammera capleta isolate GKJPGKMO chromosome blastn 29 54.7 1 Bacteria ant, tsetse, mealybug, aphid, etc. endosymbionts Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Candidatus Stammera Candidatus Stammera capleta
2067136 2067136 PRJNA798511_P_NODE_99042_length_243_cov_2.264706_g94776_i0 PRJNA798511 99042 243 2.264706 5.50323558 Candidatus Purcelliella pentastirinorum 472834 Bacteria Bacteria 52.8 0.022   NTclustered gi|2449377876|gb|CP110497.1| 472834 g94776 i0 100 0.230452674897119 28 0 12 0 79 106 325357 325330 Candidatus Purcelliella pentastirinorum isolate OPOL1 chromosome, complete genome blastn 56 52.8 1 Bacteria ant, tsetse, mealybug, aphid, etc. endosymbionts Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Candidatus Purcelliella Candidatus Purcelliella pentastirinorum
9719111 9719111 PRJNA798511_P_NODE_73628_length_280_cov_2.913043_g69362_i0 PRJNA798511 73628 280 2.913043 8.1565204 Candidatus Stammera capleta 2608262 Bacteria Bacteria 52.8 0.026   NTclustered gi|2676815342|gb|CP144817.1| 2608262 g69362 i0 100 0.1 28 0 10 0 14 41 102630 102657 MAG: Candidatus Stammera capleta isolate HMMJOMFK chromosome blastn 28 52.8 1 Bacteria ant, tsetse, mealybug, aphid, etc. endosymbionts Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Candidatus Stammera Candidatus Stammera capleta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;