RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA797655" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA797655 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5889726 5889726 PRJNA797655_S_NODE_248945_length_158_cov_2.921739_g248340_i0 PRJNA797655 248945 158 2.921739 4.61634762 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 52.8 0.013   NTclustered gi|1084299504|ref|XM_018797844.1| 6183 g248340 i0 100 0.177215189873418 28 0 18 0 24 51 1055 1082 Schistosoma mansoni hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
10986165 10986165 PRJNA797655_S_NODE_119449_length_228_cov_3.221622_g118844_i0 PRJNA797655 119449 228 3.221622 7.34529816 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 52.8 0.02   NTclustered gi|686665718|emb|LK398801.1| 57078 g118844 i0 100 0.12280701754386 28 0 12 0 188 215 3624 3597 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0005556 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;