RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA797655" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA797655 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2057643 2057643 PRJNA797655_S_NODE_107942_length_238_cov_3.184615_g107337_i0 PRJNA797655 107942 238 3.184615 7.5793837 uncultured Glomeromycotina 241622 Fungi Fungi 435 1.8200000000000003e-117   NTclustered gi|2415611543|gb|MZ480075.1| 241622 g107337 i0 99.58 99.9831932773109 238 1 100 0 1 238 219 456 Uncultured Glomeromycotina clone CHTACBSHOTU0325 small subunit ribosomal RNA gene, partial sequence blastn 23796 435 1 Eukaryota Opisthokonta Fungi Mucoromycota         uncultured Glomeromycotina
17795339 17795339 PRJNA797655_S_NODE_98334_length_247_cov_14.602941_g97729_i0 PRJNA797655 98334 247 14.602941 36.06926427 Fungi 4751 Fungi Fungi 390 4.1699999999999997e-104   NTclustered gi|658131632|emb|HF968958.1| 4874 g97729 i0 95.2 136.178137651822 250 7 100 5 1 247 1997 2244 Gigaspora margarita partial 28S rRNA gene, strain BEG34, isolate spore 4, clone BL2_6_26 blastn 33636 390 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;