RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA797655" and tax_clade = "Metamonada"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA797655 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14816970 14816970 PRJNA797655_S_NODE_70252_length_281_cov_1.210084_g69647_i0 PRJNA797655 70252 281 1.210084 3.40033604 Spironucleus salmonicida 348837 Fornicata other_Eukaryota 52.8 0.026   NTclustered gi|2794899282|ref|XM_067909524.1| 348837 g69647 i0 100 0.099644128113879 28 0 10 0 15 42 1565 1592 Spironucleus salmonicida Dynein heavy chain (SS50377_25693), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus salmonicida
25012857 25012857 PRJNA797655_S_NODE_257700_length_155_cov_2.142857_g257095_i0 PRJNA797655 257700 155 2.142857 3.32142835 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 52.8 0.013   NTclustered gi|2794886803|ref|XM_067921925.1| 135588 g257095 i0 100 0.541935483870968 28 0 18 0 88 115 334 307 Histomonas meleagridis tail fiber domain-containing protein (GO595_008359), partial mRNA blastn 84 52.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;