RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA797475" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA797475 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3332517 3332517 PRJNA797475_P_NODE_26943_length_245_cov_0.895349_g26844_i0 PRJNA797475 26943 245 0.895349 2.19360505 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 122 1.66e-23   NTclustered gi|2782948454|ref|XM_067078050.1| 252671 g26844 i0 78.723 15.8530612244898 188 36 76 4 1 186 200 385 PREDICTED: Clytia hemisphaerica late histone H2A.2.2-like (LOC136821830), mRNA blastn 3884 122 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
5885061 5885061 PRJNA797475_P_NODE_30585_length_240_cov_2.706587_g30486_i0 PRJNA797475 30585 240 2.706587 6.4958088 Anthopleura buddemeieri 1566020 Cnidaria other_Eukaryota 337 5.32e-88   NTclustered gi|1229749024|gb|KY789381.1| 1566020 g30486 i0 92.116 98.1458333333333 241 15 100 4 1 240 583 346 Anthopleura buddemeieri isolate budd 28S ribosomal RNA gene, partial sequence blastn 23555 337 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anthopleura Anthopleura buddemeieri
8434611 8434611 PRJNA797475_P_NODE_27767_length_244_cov_0.900585_g27668_i0 PRJNA797475 27767 244 0.900585 2.1974274 Hydra vulgaris 6087 Cnidaria other_Eukaryota 195 3.46e-45   NTclustered gi|2744840031|ref|XM_065787835.1| 6087 g27668 i0 82.096 5.91803278688525 229 39 93 2 17 244 839 612 PREDICTED: Hydra vulgaris rRNA 2'-O-methyltransferase fibrillarin (LOC100212665), transcript variant X4, mRNA blastn 1444 195 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
12260955 12260955 PRJNA797475_P_NODE_26810_length_245_cov_0.895349_g26711_i0 PRJNA797475 26810 245 0.895349 2.19360505 Actinia tenebrosa 6105 Cnidaria other_Eukaryota 337 5.45e-88   NTclustered gi|1778041774|ref|XM_031702547.1| 6105 g26711 i0 92.05 1.23673469387755 239 19 98 0 4 242 4207 4445 PREDICTED: Actinia tenebrosa collagen alpha-1(I) chain-like (LOC116294868), mRNA blastn 303 337 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
17359921 17359921 PRJNA797475_P_NODE_30334_length_241_cov_0.916667_g30235_i0 PRJNA797475 30334 241 0.916667 2.20916747 Anemonia sulcata 6108 Cnidaria other_Eukaryota 204 5.66e-48   NTclustered gi|2917940696|emb|OZ237557.1| 6108 g30235 i0 90.323 0.643153526970954 155 15 64 0 8 162 17552648 17552494 Anemonia sulcata genome assembly, chromosome: 3 blastn 155 204 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;