RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA797475" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA797475 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11420838 11420838 PRJNA797475_P_NODE_23049_length_249_cov_1.420455_g22950_i0 PRJNA797475 23049 249 1.420455 3.53693295 Candidatus Nanosynbacter 2093823 Bacteria Bacteria 372 1.52e-98   NTclustered gi|1663054866|gb|CP040004.1| 2572088 g22950 i0 93.574 2 249 16 100 0 1 249 237966 238214 Candidatus Nanosynbacter featherlites strain BB001 chromosome, complete genome blastn 498 372 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter featherlites
12260967 12260967 PRJNA797475_P_NODE_27630_length_244_cov_0.900585_g27531_i0 PRJNA797475 27630 244 0.900585 2.1974274 Candidatus Nanosynbacter sp. HMT-348_TM7c-JB 2933970 Bacteria Bacteria 416 6.769999999999999e-112   NTclustered gi|2179907571|gb|CP090820.1| 2933970 g27531 i0 97.541 1 244 5 100 1 1 244 669434 669192 MAG: Candidatus Nanosynbacter sp. HMT-348_TM7c-JB isolate JCVI_32_bin.19 chromosome, complete genome blastn 244 416 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp. HMT-348_TM7c-JB
17794685 17794685 PRJNA797475_P_NODE_28914_length_242_cov_1.822485_g28815_i0 PRJNA797475 28914 242 1.822485 4.4104137 Candidatus Nanosynbacteraceae 2093822 Bacteria Bacteria 387 5.26e-103   NTclustered gi|2306607015|emb|OX335598.1| 2026720 g28815 i0 95.455 164.818181818182 242 11 100 0 1 242 79863 79622 Candidatus Saccharibacteria bacterium isolate PRJEB56001 genome assembly, chromosome: contig00001 blastn 39886 387 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;