RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA797475" and tax_phylum = "Bdellovibrionota"

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tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA797475 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3332426 3332426 PRJNA797475_P_NODE_19943_length_258_cov_1.248649_g19844_i0 PRJNA797475 19943 258 1.248649 3.22151442 Peredibacter starrii 28202 Bacteria Bacteria 459 1.18e-124   NTclustered gi|2631252187|gb|CP139487.1| 28202 g19844 i0 98.837 194.410852713178 258 1 99 1 3 258 511962 511705 Peredibacter starrii strain A3.12 chromosome, complete genome blastn 50158 459 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Peredibacter Peredibacter starrii
5884865 5884865 PRJNA797475_P_NODE_16685_length_275_cov_1.153465_g16586_i0 PRJNA797475 16685 275 1.153465 3.17202875 uncultured Oligoflexales bacterium 2735263 Bacteria Bacteria 265 2.9799999999999995e-66   NTclustered gi|2531963191|emb|OY282434.1| 2735263 g16586 i0 84.058 94.6727272727273 276 43 100 1 1 275 955395 955120 MAG: uncultured Oligoflexales bacterium genome assembly, chromosome: 1 blastn 26035 265 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Oligoflexales     uncultured Oligoflexales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;