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contig_metadata

30 rows where analysis = "blastn", bioproject = "PRJNA797475" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 30 ✖

bioproject 1

  • PRJNA797475 · 30 ✖

analysis 1

  • blastn · 30 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1216872 1216872 PRJNA797475_P_NODE_2241_length_650_cov_2.213172_g2144_i0 PRJNA797475 2241 650 2.213172 14.385618 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 736 0   NTclustered gi|161207|gb|M21500.1|SLMACT35 5791 g2144 i0 87.097 99.8030769230769 651 82 100 2 1 650 443 1092 P.polycephalum actin (Ppa35) mRNA, complete cds blastn 64872 743 0.990578734858681 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
2057175 2057175 PRJNA797475_P_NODE_15082_length_283_cov_1.466667_g14983_i0 PRJNA797475 15082 283 1.466667 4.15066761 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 137 7.01e-28   NTclustered gi|470517203|ref|XM_004353125.1| 1257118 g14983 i0 81.006 20.1554770318021 179 28 62 5 1 176 1388 1213 Acanthamoeba castellanii str. Neff alanineglyoxylate aminotransferase (ACA1_072820), partial mRNA blastn 5704 137 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
2492362 2492362 PRJNA797475_P_NODE_20362_length_256_cov_1.262295_g20263_i0 PRJNA797475 20362 256 1.262295 3.2314752 Entamoeba 5758 Evosea other_Eukaryota 76.8 1.38e-9   NTclustered gi|511090867|dbj|AK422769.1| 33085 g20263 i0 88.889 1.9609375 63 5 24 2 195 256 975 914 Entamoeba invadens cDNA clone: Xei-006M17, 60S ribosomal protein L3, putative, complete cds, strain: IP1 blastn 502 76.8 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
4609872 4609872 PRJNA797475_P_NODE_6064_length_410_cov_1.551929_g5966_i0 PRJNA797475 6064 410 1.551929 6.3629089 Platyamoeba placida 3454475 Discosea other_Eukaryota 545 1.48e-150   NTclustered gi|33946348|gb|AY294153.1| 197527 g5966 i0 91.067 99.3512195121951 403 36 98 0 8 410 1080 678 Platyamoeba placida actin mRNA, partial cds blastn 40734 545 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
5885007 5885007 PRJNA797475_P_NODE_27285_length_244_cov_1.766082_g27186_i0 PRJNA797475 27285 244 1.766082 4.30924008 Didymium iridis 5793 Evosea other_Eukaryota 296 9.21e-76   NTclustered gi|2687|emb|X60210.1| 5793 g27186 i0 88.525 7.35245901639344 244 28 100 0 1 244 2552 2309 D.iridis LSU rRNA gene blastn 1794 296 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
5885069 5885069 PRJNA797475_P_NODE_3685_length_515_cov_1.719457_g3587_i0 PRJNA797475 3685 515 1.719457 8.85520355 Telaepolella tubasferens 1346289 Evosea other_Eukaryota 459 2.54e-124   NTclustered gi|167859713|gb|EU273436.1| 1346289 g3587 i0 82.785 100.497087378641 517 85 100 4 1 515 230 744 Telaepolella tubasferens clone 2 actin gene, partial cds blastn 51756 459 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Telaepolella Telaepolella tubasferens
5885124 5885124 PRJNA797475_P_NODE_9085_length_345_cov_1.294118_g8986_i0 PRJNA797475 9085 345 1.294118 4.4647071 Polyschismium peyerimhoffii 2911783 Evosea other_Eukaryota 143 1.88e-29   NTclustered gi|2161226355|gb|MZ313553.1| 2911783 g8986 i0 75.342 3.58550724637681 365 55 99 24 1 343 6259 6610 Polyschismium peyerimhoffii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1237 143 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Polyschismium Polyschismium peyerimhoffii
5885126 5885126 PRJNA797475_P_NODE_9485_length_339_cov_1.135338_g9386_i0 PRJNA797475 9485 339 1.135338 3.84879582 Polyschismium peyerimhoffii 2911783 Evosea other_Eukaryota 303 8e-78   NTclustered gi|2161226355|gb|MZ313553.1| 2911783 g9386 i0 83.333 55.2330383480826 360 28 99 23 2 339 7079 6730 Polyschismium peyerimhoffii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 18724 303 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Polyschismium Polyschismium peyerimhoffii
6320968 6320968 PRJNA797475_P_NODE_20545_length_255_cov_1.269231_g20446_i0 PRJNA797475 20545 255 1.269231 3.23653905 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 455 1.51e-123   NTclustered gi|300078498|gb|GU001160.1| 5755 g20446 i0 98.828 47.2823529411765 256 2 100 1 1 255 3976 4231 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 12057 457 0.99562363238512 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8434423 8434423 PRJNA797475_P_NODE_13067_length_296_cov_1.919283_g12968_i0 PRJNA797475 13067 296 1.919283 5.68107768 Cochliopodium minus 313997 Discosea other_Eukaryota 424 5.0599999999999996e-114   NTclustered gi|330902862|gb|JF298257.1| 313997 g12968 i0 92.691 60.2466216216216 301 11 99 8 4 296 1598 1301 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 17833 424 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
9709568 9709568 PRJNA797475_P_NODE_15548_length_281_cov_1.004808_g15449_i0 PRJNA797475 15548 281 1.004808 2.82351048 Ripella tribonemae 2047823 Discosea other_Eukaryota 427 3.68e-115   NTclustered gi|1269228475|gb|MF683600.1| 2047823 g15449 i0 94.643 95.6725978647687 280 8 99 6 1 279 629 902 Ripella tribonemae clone 22.9.6 18S ribosomal RNA gene, partial sequence blastn 26884 427 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella tribonemae
9709653 9709653 PRJNA797475_P_NODE_22908_length_249_cov_2.556818_g22809_i0 PRJNA797475 22908 249 2.556818 6.36647682 Cochliopodium arabianum 1676989 Discosea other_Eukaryota 239 1.61e-58   NTclustered gi|861685104|gb|KP244686.1| 1676989 g22809 i0 84.462 23.6626506024096 251 30 99 6 1 248 297 541 Cochliopodium arabianum voucher YT357_364 18S ribosomal RNA gene, partial sequence blastn 5892 239 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium arabianum
10145497 10145497 PRJNA797475_P_NODE_548_length_1212_cov_7.993854_g500_i0 PRJNA797475 548 1212 7.993854 96.88551048 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 300 4e-76   NTclustered gi|300078498|gb|GU001160.1| 5755 g500 i0 81.72 303.037128712871 372 57 67 9 848 1212 4469 4836 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 367281 303 0.99009900990099 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10985303 10985303 PRJNA797475_P_NODE_14989_length_283_cov_6.666667_g14890_i0 PRJNA797475 14989 283 6.666667 18.86666761 Vermamoeba sp. 1972851 Tubulinea other_Eukaryota 438 1.7199999999999995e-118   NTclustered gi|2651357782|gb|PP174298.1| 1972851 g14890 i0 94.681 37.8904593639576 282 15 99 0 1 282 3931 4212 Vermamoeba sp. isolate 22 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 10723 438 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba sp.
10985426 10985426 PRJNA797475_P_NODE_2549_length_611_cov_1.500000_g2451_i0 PRJNA797475 2549 611 1.5 9.165 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 1074 0   NTclustered gi|300078496|gb|GU001158.1| 5778 g2451 i0 98.363 45.8837970540098 611 10 100 0 1 611 2873 2263 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 28035 1074 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
10985451 10985451 PRJNA797475_P_NODE_27109_length_245_cov_0.895349_g27010_i0 PRJNA797475 27109 245 0.895349 2.19360505 Acytostelium subglobosum 361139 Evosea other_Eukaryota 117 7.73e-22   NTclustered gi|831760976|ref|XM_012894663.1| 1410327 g27010 i0 82.353 0.555102040816327 136 22 55 2 39 173 1258 1392 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 136 117 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
12260853 12260853 PRJNA797475_P_NODE_19090_length_262_cov_2.259259_g18991_i0 PRJNA797475 19090 262 2.259259 5.91925858 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 150 8.24e-32   NTclustered gi|470442906|ref|XM_004339540.1| 1257118 g18991 i0 80.198 16.3473282442748 202 38 77 2 60 260 34 234 Acanthamoeba castellanii str. Neff 60S ribosomal protein, putative (ACA1_063390), partial mRNA blastn 4283 150 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13534988 13534988 PRJNA797475_P_NODE_15371_length_281_cov_2.730769_g15272_i0 PRJNA797475 15371 281 2.730769 7.67346089 Amoebozoa sp. 1892891 Root_unresolved Root_unresolved 224 5.1899999999999997e-54   NTclustered gi|2651357789|gb|PP174304.1| 1892891 g15272 i0 81.338 11.9359430604982 284 45 100 5 1 281 3877 3599 Amoebozoa sp. isolate 114_WLI small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 3354 224 1 Eukaryota Amoebozoa             Amoebozoa sp.
13535187 13535187 PRJNA797475_P_NODE_29771_length_241_cov_1.833333_g29672_i0 PRJNA797475 29771 241 1.833333 4.41833253 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 394 3.13e-105   NTclustered gi|300078498|gb|GU001160.1| 5755 g29672 i0 96.281 2.60995850622407 242 5 99 4 2 241 7038 6799 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 629 394 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14810103 14810103 PRJNA797475_P_NODE_752_length_1060_cov_2.933131_g686_i0 PRJNA797475 752 1060 2.933131 31.0911886 Acytostelium subglobosum 361139 Evosea other_Eukaryota 603 2.3699999999999996e-167   NTclustered gi|831784126|ref|XM_012901914.1| 1410327 g686 i0 77.557 70.9094339622641 1056 200 97 28 22 1054 1290 249 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 75164 603 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
15245341 15245341 PRJNA797475_P_NODE_16352_length_276_cov_2.921182_g16253_i0 PRJNA797475 16352 276 2.921182 8.06246232 Vannellidae 95227 Discosea other_Eukaryota 416 7.809999999999998e-112   NTclustered gi|62865939|gb|AY929914.1| 325077 g16253 i0 96.094 94.1666666666667 256 8 92 2 1 254 1629 1374 Vannella sp. strain CAZ6/I 18S small subunit ribosomal RNA gene, partial sequence blastn 25990 416 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain CAZ6/I
18632930 18632930 PRJNA797475_P_NODE_24255_length_248_cov_0.880000_g24156_i0 PRJNA797475 24255 248 0.88 2.1824 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 355 1.53e-93   NTclustered gi|659103926|gb|KJ569726.1| 1512276 g24156 i0 92.49 39.9516129032258 253 12 100 7 1 248 1976 1726 Cochliopodium kieliense clone 9605 18S ribosomal RNA gene, partial sequence blastn 9908 355 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense
21183825 21183825 PRJNA797475_P_NODE_20777_length_253_cov_2.438889_g20678_i0 PRJNA797475 20777 253 2.438889 6.17038917 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 388 1.5399999999999998e-103   NTclustered gi|909719645|gb|KT185625.1| 5778 g20678 i0 94.488 1.78260869565217 254 10 99 4 2 253 7099 6848 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 451 388 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
21183960 21183960 PRJNA797475_P_NODE_2997_length_564_cov_1.898167_g2899_i0 PRJNA797475 2997 564 1.898167 10.70566188 Cochliopodium minus 313997 Discosea other_Eukaryota 481 5.98e-131   NTclustered gi|330902862|gb|JF298257.1| 313997 g2899 i0 90.451 10.3617021276596 377 19 66 12 3 372 370 4 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 5844 481 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
21184017 21184017 PRJNA797475_P_NODE_9237_length_343_cov_0.996296_g9138_i0 PRJNA797475 9237 343 0.996296 3.41729528 Dictyostelium discoideum 44689 Evosea other_Eukaryota 433 9.909999999999998e-117   NTclustered gi|66804710|ref|XM_630996.1| 352472 g9138 i0 89.474 96.9533527696793 342 36 99 0 1 342 1002 661 Dictyostelium discoideum AX4 hypothetical protein (act5) mRNA, complete cds blastn 33255 433 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
22458490 22458490 PRJNA797475_P_NODE_18098_length_267_cov_2.108247_g17999_i0 PRJNA797475 18098 267 2.108247 5.62901949 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 398 2.7199999999999995e-106   NTclustered gi|330902856|gb|JF298254.1| 1017091 g17999 i0 93.68 24.0486891385768 269 11 100 5 1 267 1038 1302 Cochliopodium larifeili clone 902 18S ribosomal RNA gene, partial sequence blastn 6421 398 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
22458593 22458593 PRJNA797475_P_NODE_26438_length_245_cov_1.575581_g26339_i0 PRJNA797475 26438 245 1.575581 3.86017345 Grellamoeba robusta 690712 Evosea other_Eukaryota 113 1e-20   NTclustered gi|268549249|gb|GQ438741.1| 690712 g26339 i0 82.836 27.3673469387755 134 16 54 6 1 132 45 173 Amoebozoa sp. 4168 clone 122 small subunit ribosomal RNA gene, partial sequence blastn 6705 113 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Grellamoeba Grellamoeba robusta
23734135 23734135 PRJNA797475_P_NODE_17379_length_271_cov_1.555556_g17280_i0 PRJNA797475 17379 271 1.555556 4.21555676 Stenamoeba aeronauta 2971262 Discosea other_Eukaryota 436 5.87e-118   NTclustered gi|2283789716|gb|OP179856.1| 2971262 g17280 i0 95.636 75.2214022140221 275 7 100 5 1 271 442 169 Stenamoeba aeronauta strain Stenaero small subunit ribosomal RNA gene, partial sequence blastn 20385 436 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Stenamoeba Stenamoeba aeronauta
25007833 25007833 PRJNA797475_P_NODE_23700_length_249_cov_0.875000_g23601_i0 PRJNA797475 23700 249 0.875 2.17875 Physarum polycephalum 5791 Evosea other_Eukaryota 128 3.64e-25   NTclustered gi|175957|gb|M19232.1|SLMRRMPP 5791 g23601 i0 83.217 1.14859437751004 143 20 57 4 1 141 352 212 Slime mold (P.polycephalum) 28S large subunit rRNA, 5' end blastn 286 128 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
25007875 25007875 PRJNA797475_P_NODE_26160_length_246_cov_0.890173_g26061_i0 PRJNA797475 26160 246 0.890173 2.18982558 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 444 3.14e-120   NTclustered gi|399764261|gb|JQ271772.1| 1105345 g26061 i0 99.187 60.8455284552846 246 2 100 0 1 246 1992 1747 Vexillifera bacillipedes strain 6HZM 18S ribosomal RNA gene, partial sequence blastn 14968 444 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;