RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

20 rows where analysis = "blastn", bioproject = "PRJNA796975" and tax_phylum = "Basidiomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 20 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA796975 · 20 ✖

analysis 1

  • blastn · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2492298 2492298 PRJNA796975_S_NODE_5402_length_203_cov_2.019481_g5325_i0 PRJNA796975 5402 203 2.019481 4.09954643 Erythrobasidium 5413 Fungi Fungi 370 4.3e-98   NTclustered gi|1674559207|gb|MK990696.1| 5414 g5325 i0 99.507 94.4926108374384 203 1 100 0 1 203 541 339 Erythrobasidium hasegawianum strain MCA6865 large subunit ribosomal RNA gene, partial sequence blastn 19182 370 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Erythrobasidiales Erythrobasidiaceae Erythrobasidium Erythrobasidium hasegawianum
3332261 3332261 PRJNA796975_S_NODE_15403_length_161_cov_0.910714_g15326_i0 PRJNA796975 15403 161 0.910714 1.46624954 Malassezia restricta 76775 Fungi Fungi 298 1.56e-76   NTclustered gi|1546630665|ref|XM_027626993.1| 76775 g15326 i0 100 1 161 0 100 0 1 161 169 9 Malassezia restricta uncharacterized protein (MRET_0366), partial mRNA blastn 161 298 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
7159553 7159553 PRJNA796975_S_NODE_13606_length_163_cov_0.894737_g13529_i0 PRJNA796975 13606 163 0.894737 1.45842131 Chondrostereum purpureum 58369 Fungi Fungi 265 1.6e-66   NTclustered gi|930580449|gb|KR264909.1| 58369 g13529 i0 95.758 100.815950920245 165 5 100 1 1 163 6005 6169 Chondrostereum purpureum 18S ribosomal RNA gene, partial sequence; and internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S ribosomal RNA gene, intergenic spacer 1, 5S ribosomal RNA gene, and intergenic spacer 2, complete sequence blastn 16433 265 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Cyphellaceae Chondrostereum Chondrostereum purpureum
7159582 7159582 PRJNA796975_S_NODE_2006_length_299_cov_2.448000_g1929_i0 PRJNA796975 2006 299 2.448 7.31952 Erythrobasidium hasegawianum 5414 Fungi Fungi 542 1.35e-149   NTclustered gi|762216299|emb|HG421447.1| 5414 g1929 i0 99.331 97.9397993311037 299 2 100 0 1 299 334 632 Erythrobasidium hasegawianum mitochondrial partial 26S rRNA gene, isolate MOM_882 blastn 29284 542 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Erythrobasidiales Erythrobasidiaceae Erythrobasidium Erythrobasidium hasegawianum
7159645 7159645 PRJNA796975_S_NODE_9886_length_167_cov_0.864407_g9809_i0 PRJNA796975 9886 167 0.864407 1.44355969 Malassezia restricta 76775 Fungi Fungi 309 7.53e-80   NTclustered gi|1546634584|ref|XM_027628952.1| 76775 g9809 i0 100 1.98203592814371 167 0 100 0 1 167 789 955 Malassezia restricta DNA replication licensing factor MCM2 (MRET_2325), partial mRNA blastn 331 309 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
7594981 7594981 PRJNA796975_S_NODE_4546_length_216_cov_4.970060_g4469_i0 PRJNA796975 4546 216 4.97006 10.7353296 Erythrobasidium 5413 Fungi Fungi 399 5.909999999999999e-107   NTclustered gi|406205|dbj|D12803.1|ERHSSRD3 5414 g4469 i0 100 100.00462962963 216 0 100 0 1 216 73 288 Erythrobasidium hasegawianum gene for small subunit ribosomal RNA blastn 21601 399 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Erythrobasidiales Erythrobasidiaceae Erythrobasidium Erythrobasidium hasegawianum
10985180 10985180 PRJNA796975_S_NODE_15249_length_161_cov_0.910714_g15172_i0 PRJNA796975 15249 161 0.910714 1.46624954 Malassezia restricta 76775 Fungi Fungi 241 2.66e-59   NTclustered gi|1546636589|ref|XM_027629937.1| 76775 g15172 i0 99.248 0.826086956521739 133 1 83 0 1 133 133 1 Malassezia restricta mitogen-activated protein kinase 1/3 (MRET_3310), partial mRNA blastn 133 241 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
12260681 12260681 PRJNA796975_S_NODE_13950_length_162_cov_0.902655_g13873_i0 PRJNA796975 13950 162 0.902655 1.4623011 Fomitiporia mediterranea 208960 Fungi Fungi 137 3.6199999999999997e-28   NTclustered gi|595770355|ref|XM_007263659.1| 694068 g13873 i0 82.278 1.44444444444444 158 28 98 0 3 160 1816 1973 Fomitiporia mediterranea MF3/22 ATP citrate lyase isoform 2 (FOMMEDRAFT_17859), mRNA blastn 234 137 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Hymenochaetales Hymenochaetaceae Fomitiporia Fomitiporia mediterranea
16083711 16083711 PRJNA796975_S_NODE_14213_length_162_cov_0.902655_g14136_i0 PRJNA796975 14213 162 0.902655 1.4623011 Malassezia restricta 76775 Fungi Fungi 294 2.03e-75   NTclustered gi|1546631291|ref|XM_027627306.1| 76775 g14136 i0 99.383 1 162 1 100 0 1 162 6656 6817 Malassezia restricta ferricrocin synthase (MRET_0679), partial mRNA blastn 162 294 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
17359539 17359539 PRJNA796975_S_NODE_11534_length_165_cov_0.879310_g11457_i0 PRJNA796975 11534 165 0.87931 1.4508615 Malassezia restricta 76775 Fungi Fungi 305 9.59e-79   NTclustered gi|1546637819|ref|XM_027630551.1| 76775 g11457 i0 100 1 165 0 100 0 1 165 984 820 Malassezia restricta vacuole morphology and inheritance protein 14 (MRET_3924), partial mRNA blastn 165 305 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
18632690 18632690 PRJNA796975_S_NODE_15175_length_161_cov_0.910714_g15098_i0 PRJNA796975 15175 161 0.910714 1.46624954 Malassezia restricta 76775 Fungi Fungi 298 1.56e-76   NTclustered gi|1546636765|ref|XM_027630025.1| 76775 g15098 i0 100 1.96894409937888 161 0 100 0 1 161 1116 956 Malassezia restricta myo-inositol-1-phosphate synthase (MRET_3398), partial mRNA blastn 317 298 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
18632736 18632736 PRJNA796975_S_NODE_7095_length_185_cov_1.147059_g7018_i0 PRJNA796975 7095 185 1.147059 2.12205915 Malassezia restricta 76775 Fungi Fungi 337 3.89e-88   NTclustered gi|1546637861|ref|XM_027630572.1| 76775 g7018 i0 99.459 1 185 1 100 0 1 185 928 744 Malassezia restricta uncharacterized protein (MRET_3945), partial mRNA blastn 185 337 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
19068552 19068552 PRJNA796975_S_NODE_4735_length_213_cov_2.664634_g4658_i0 PRJNA796975 4735 213 2.664634 5.67567042 Basidiomycota 5204 Fungi Fungi 350 5.94e-92   NTclustered gi|406205|dbj|D12803.1|ERHSSRD3 5414 g4658 i0 96.244 100.009389671362 213 8 100 0 1 213 1408 1620 Erythrobasidium hasegawianum gene for small subunit ribosomal RNA blastn 21302 350 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Erythrobasidiales Erythrobasidiaceae Erythrobasidium Erythrobasidium hasegawianum
19068567 19068567 PRJNA796975_S_NODE_7515_length_181_cov_2.704545_g7438_i0 PRJNA796975 7515 181 2.704545 4.89522645 Basidiomycota 5204 Fungi Fungi 335 1.36e-87   NTclustered gi|110169462|gb|DQ663697.1| 5414 g7438 i0 100 100.022099447514 181 0 100 0 1 181 926 746 Erythrobasidium hasegawianum isolate AFTOL-ID 1771 18S small subunit ribosomal RNA gene, partial sequence blastn 18104 335 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Erythrobasidiales Erythrobasidiaceae Erythrobasidium Erythrobasidium hasegawianum
20343324 20343324 PRJNA796975_S_NODE_6656_length_189_cov_1.457143_g6579_i0 PRJNA796975 6656 189 1.457143 2.75400027 Fungi 4751 Fungi Fungi 289 1.14e-73   NTclustered gi|1394846613|gb|MH427374.1| 5535 g6579 i0 94.241 100.513227513228 191 7 100 3 1 189 370 182 Rhodotorula glutinis strain SY01 large subunit ribosomal RNA gene, partial sequence blastn 18997 289 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula glutinis
21183720 21183720 PRJNA796975_S_NODE_9857_length_167_cov_0.864407_g9780_i0 PRJNA796975 9857 167 0.864407 1.44355969 Wallemia mellicola 1708541 Fungi Fungi 309 7.53e-80   NTclustered gi|588260172|ref|XM_006959178.1| 671144 g9780 i0 100 1 167 0 100 0 1 167 1587 1753 Wallemia mellicola CBS 633.66 Coatomer, beta' subunit partial mRNA blastn 167 309 1 Eukaryota Opisthokonta Fungi Basidiomycota Wallemiomycetes Wallemiales Wallemiaceae Wallemia Wallemia mellicola
21618992 21618992 PRJNA796975_S_NODE_15657_length_159_cov_2.254545_g15580_i0 PRJNA796975 15657 159 2.254545 3.58472655 Erythrobasidium 5413 Fungi Fungi 294 1.98e-75   NTclustered gi|1826549609|gb|MT256141.1| 5414 g15580 i0 100 100.25786163522 159 0 100 0 1 159 632 474 Erythrobasidium hasegawianum isolate 1Y146 large subunit ribosomal RNA gene, partial sequence blastn 15941 294 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Erythrobasidiales Erythrobasidiaceae Erythrobasidium Erythrobasidium hasegawianum
22458352 22458352 PRJNA796975_S_NODE_14198_length_162_cov_0.902655_g14121_i0 PRJNA796975 14198 162 0.902655 1.4623011 Malassezia restricta 76775 Fungi Fungi 272 9.51e-69   NTclustered gi|1546632986|ref|XM_027628153.1| 76775 g14121 i0 96.914 2.59259259259259 162 5 100 0 1 162 1034 1195 Malassezia restricta O-acetylhomoserine/O-acetylserine sulfhydrylase (MRET_1526), partial mRNA blastn 420 272 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
25007559 25007559 PRJNA796975_S_NODE_10200_length_166_cov_1.307692_g10123_i0 PRJNA796975 10200 166 1.307692 2.17076872 Cystobasidium laryngis 105772 Fungi Fungi 241 2.76e-59   NTclustered gi|1358186635|gb|MH047192.1| 105772 g10123 i0 92.771 103.072289156627 166 12 100 0 1 166 3929 4094 Cystobasidium laryngis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 17110 241 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Cystobasidiales Cystobasidiaceae Cystobasidium Cystobasidium laryngis
25007674 25007674 PRJNA796975_S_NODE_9920_length_167_cov_0.864407_g9843_i0 PRJNA796975 9920 167 0.864407 1.44355969 Malassezia restricta 76775 Fungi Fungi 235 1.3e-57   NTclustered gi|1546630447|ref|XM_027626884.1| 76775 g9843 i0 92.169 0.994011976047904 166 13 99 0 2 167 571 736 Malassezia restricta mitochondrial inner membrane carnitine transporter (MRET_0257), partial mRNA blastn 166 235 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;