RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA796753" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA796753 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3331940 3331940 PRJNA796753_P_NODE_623_length_1416_cov_5.238273_g305_i2 PRJNA796753 623 1416 5.238273 74.17394568 Linderina pennispora 61395 Fungi Fungi 62.1 2.41e-4   NTclustered gi|2028324460|ref|XM_040888264.1| 61395 g305 i2 100 0.0889830508474576 33 0 2 0 998 1030 2130 2098 Linderina pennispora uncharacterized protein (DL89DRAFT_269355), mRNA blastn 126 62.1 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
4609002 4609002 PRJNA796753_P_NODE_21124_length_322_cov_1.654618_g20812_i0 PRJNA796753 21124 322 1.654618 5.32786996 Kickxella alabastrina 61397 Fungi Fungi 54.7 0.008   NTclustered gi|666440441|gb|KF848900.1| 61397 g20812 i0 100 0.0900621118012422 29 0 9 0 180 208 1719 1747 Kickxella alabastrina strain NRRL-2693 28S ribosomal RNA gene, partial sequence blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
12260218 12260218 PRJNA796753_P_NODE_35690_length_261_cov_1.515957_g35378_i0 PRJNA796753 35690 261 1.515957 3.95664777 Genistelloides hibernus 4887 Fungi Fungi 252 2.19e-62   NTclustered gi|666440449|gb|KF848908.1| 4887 g35378 i0 84.528 93.6934865900383 265 29 97 11 1 254 1328 1065 Genistelloides hibernus 28S ribosomal RNA gene, partial sequence blastn 24454 252 1 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Legeriomycetaceae Genistelloides Genistelloides hibernus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;