contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJNA796753" and tax_phylum = "Tubulinea"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2056744 | 2056744 | PRJNA796753_P_NODE_582_length_1445_cov_27.463557_g480_i0 | PRJNA796753 | 582 | 1445 | 27.463557 | 396.84839865 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 1546 | 0 | NTclustered | gi|508737347|dbj|AB766053.1| | 931554 | g480 | i0 | 86.876 | 68.9640138408304 | 1402 | 158 | 96 | 14 | 43 | 1422 | 1398 | 1 | Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 | blastn | 99653 | 1546 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea | ||
| 4609024 | 4609024 | PRJNA796753_P_NODE_26004_length_295_cov_0.873874_g25692_i0 | PRJNA796753 | 26004 | 295 | 0.873874 | 2.5779283 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 239 | 1.9600000000000003e-58 | NTclustered | gi|508737347|dbj|AB766053.1| | 931554 | g25692 | i0 | 82.374 | 0.942372881355932 | 278 | 45 | 94 | 4 | 20 | 295 | 1386 | 1111 | Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 | blastn | 278 | 239 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea | ||
| 8433909 | 8433909 | PRJNA796753_P_NODE_47487_length_245_cov_2.087209_g47175_i0 | PRJNA796753 | 47487 | 245 | 2.087209 | 5.11366205 | Glaeseria mira | 242547 | Tubulinea | other_Eukaryota | 303 | 5.53e-78 | NTclustered | gi|33946352|gb|AY294155.1| | 242547 | g47175 | i0 | 89.024 | 93.6040816326531 | 246 | 26 | 100 | 1 | 1 | 245 | 270 | 25 | Glaeseria mira actin mRNA, partial cds | blastn | 22933 | 303 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Glaeseria | Glaeseria mira | ||
| 16083121 | 16083121 | PRJNA796753_P_NODE_13053_length_389_cov_2.506329_g12741_i0 | PRJNA796753 | 13053 | 389 | 2.506329 | 9.74961981 | Saccamoeba limax | 136464 | Tubulinea | other_Eukaryota | 713 | 0 | NTclustered | gi|213950421|gb|EU869301.1| | 136464 | g12741 | i0 | 99.743 | 23.4858611825193 | 389 | 1 | 100 | 0 | 1 | 389 | 1498 | 1886 | Saccamoeba limax strain NTSHR small subunit ribosomal RNA gene, partial sequence | blastn | 9136 | 713 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Saccamoeba | Saccamoeba limax | ||
| 16083151 | 16083151 | PRJNA796753_P_NODE_18813_length_337_cov_1.575758_g18501_i0 | PRJNA796753 | 18813 | 337 | 1.575758 | 5.31030446 | Hartmannella cantabrigiensis | 239731 | Tubulinea | other_Eukaryota | 425 | 1.63e-114 | NTclustered | gi|33946358|gb|AY294158.1| | 239731 | g18501 | i0 | 93.95 | 77.7181008902077 | 281 | 17 | 83 | 0 | 57 | 337 | 1151 | 871 | Hartmannella cantabrigiensis actin mRNA, complete cds | blastn | 26191 | 425 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Hartmannella | Hartmannella cantabrigiensis | ||
| 16083393 | 16083393 | PRJNA796753_P_NODE_9233_length_454_cov_1.711286_g8921_i0 | PRJNA796753 | 9233 | 454 | 1.711286 | 7.76923844 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 616 | 1.2399999999999999e-171 | NTclustered | gi|62910949|gb|AY925001.1| | 5778 | g8921 | i0 | 94.911 | 1.06828193832599 | 393 | 20 | 87 | 0 | 62 | 454 | 1 | 393 | Hartmannella vermiformis Rpl7A mRNA, partial cds | blastn | 485 | 616 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 19907421 | 19907421 | PRJNA796753_P_NODE_17096_length_349_cov_1.952899_g16784_i0 | PRJNA796753 | 17096 | 349 | 1.952899 | 6.81561751 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 398 | 3.6699999999999982e-106 | NTclustered | gi|508737347|dbj|AB766053.1| | 931554 | g16784 | i0 | 88.889 | 33.7994269340974 | 324 | 34 | 93 | 2 | 6 | 328 | 221 | 543 | Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 | blastn | 11796 | 398 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea | ||
| 22457737 | 22457737 | PRJNA796753_P_NODE_13218_length_387_cov_1.961783_g12906_i0 | PRJNA796753 | 13218 | 387 | 1.961783 | 7.59210021 | Saccamoeba limax | 136464 | Tubulinea | other_Eukaryota | 684 | 0 | NTclustered | gi|213950421|gb|EU869301.1| | 136464 | g12906 | i0 | 98.462 | 72.2093023255814 | 390 | 3 | 100 | 1 | 1 | 387 | 1280 | 891 | Saccamoeba limax strain NTSHR small subunit ribosomal RNA gene, partial sequence | blastn | 27945 | 684 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Saccamoeba | Saccamoeba limax | ||
| 25007039 | 25007039 | PRJNA796753_P_NODE_17940_length_343_cov_1.140741_g17628_i0 | PRJNA796753 | 17940 | 343 | 1.140741 | 3.91274163 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 501 | 2.6799999999999993e-137 | NTclustered | gi|423292048|gb|JQ519470.1| | 5778 | g17628 | i0 | 96.98 | 93.2827988338192 | 298 | 9 | 87 | 0 | 44 | 341 | 908 | 611 | Vermamoeba vermiformis clone JG10.132_b5 alpha tubulin gene, partial cds | blastn | 31996 | 501 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;