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contig_metadata

20 rows where analysis = "blastn", bioproject = "PRJNA796753" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 20 ✖

tax_clade 1

bioproject 1

  • PRJNA796753 · 20 ✖

analysis 1

  • blastn · 20 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
780702 780702 PRJNA796753_P_NODE_3941_length_672_cov_5.522538_g3642_i0 PRJNA796753 3941 672 5.522538 37.11145536 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 433 2.05e-116   NTclustered gi|695389557|ref|XM_009521174.1| 67593 g3642 i0 87.139 305.924107142857 381 49 57 0 3 383 544 924 Phytophthora sojae hypothetical protein partial mRNA blastn 205581 433 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
9708865 9708865 PRJNA796753_P_NODE_208_length_1967_cov_4.329461_g177_i0 PRJNA796753 208 1967 4.329461 85.16049787 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 407 3.76e-108   NTclustered gi|2795048880|ref|XM_067943659.1| 4785 g177 i0 83.036 23.3431621759024 448 76 23 0 76 523 1 448 Phytophthora cinnamomi Calmodulin (IUM83_18649), partial mRNA blastn 45916 407 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
9709062 9709062 PRJNA796753_P_NODE_52988_length_242_cov_0.911243_g52676_i0 PRJNA796753 52988 242 0.911243 2.20520806 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 159 1.2499999999999999e-34   NTclustered gi|166041590|emb|CU357622.1| 100861 g52676 i0 79.817 10.198347107438 218 44 90 0 24 241 364 147 Aphanomyces euteiches cDNA blastn 2468 159 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
10145259 10145259 PRJNA796753_P_NODE_5248_length_589_cov_0.736434_g4941_i0 PRJNA796753 5248 589 0.736434 4.33759626 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 466 1.75e-126   NTclustered gi|2795027172|ref|XM_067926257.1| 4785 g4941 i0 83.951 47.5517826825127 486 78 83 0 70 555 1473 988 Phytophthora cinnamomi citrate (Si)-synthase, eukaryotic (IUM83_02347), partial mRNA blastn 28008 470 0.991489361702128 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
10145269 10145269 PRJNA796753_P_NODE_6208_length_543_cov_2.651064_g5900_i0 PRJNA796753 6208 543 2.651064 14.39527752 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 326 2.85e-84   NTclustered gi|2795040529|ref|XM_067944818.1| 4785 g5900 i0 83.429 63.6022099447514 350 58 64 0 77 426 77 426 Phytophthora cinnamomi 60S ribosomal protein L23 (IUM83_19754), partial mRNA blastn 34536 329 0.990881458966565 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
10984689 10984689 PRJNA796753_P_NODE_36029_length_260_cov_1.374332_g35717_i0 PRJNA796753 36029 260 1.374332 3.5732632 Phytophthora ramorum 164328 SAR_Eukaryotes SAR_Eukaryotes 195 3.72e-45   NTclustered gi|2794885911|ref|XM_067885836.1| 164328 g35717 i0 89.172 34.6307692307692 157 15 60 2 100 255 189 34 Phytophthora ramorum 60S ribosomal protein L27a (KRP23_1503), partial mRNA blastn 9004 195 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
12260282 12260282 PRJNA796753_P_NODE_44450_length_248_cov_0.880000_g44138_i0 PRJNA796753 44450 248 0.88 2.1824 Bremia lactucae 4779 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|2794711540|ref|XM_067958869.1| 4779 g44138 i0 100 0.116935483870968 29 0 12 0 50 78 1337 1309 Bremia lactucae uncharacterized protein (CCR75_000763), partial mRNA blastn 29 54.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
13534244 13534244 PRJNA796753_P_NODE_14131_length_377_cov_1.763158_g13819_i0 PRJNA796753 14131 377 1.763158 6.64710566 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 261 5.48e-65   NTclustered gi|2795024423|ref|XM_067938288.1| 4785 g13819 i0 79.63 77.1856763925729 378 65 99 10 1 372 372 1 Phytophthora cinnamomi 60S ribosomal protein (IUM83_13598), partial mRNA blastn 29099 261 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
13534314 13534314 PRJNA796753_P_NODE_24411_length_303_cov_2.343478_g24099_i0 PRJNA796753 24411 303 2.343478 7.10073834 Phytophthora ramorum 164328 SAR_Eukaryotes SAR_Eukaryotes 272 1.99e-68   NTclustered gi|2794882649|ref|XM_067895061.1| 164328 g24099 i0 83.916 44.478547854785504 286 44 94 2 19 303 546 262 Phytophthora ramorum ADP-ribosylation factor (KRP23_969), partial mRNA blastn 13477 272 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
13534540 13534540 PRJNA796753_P_NODE_7511_length_497_cov_3.561321_g7200_i0 PRJNA796753 7511 497 3.561321 17.69976537 Achlya klebsiana 4767 SAR_Eukaryotes SAR_Eukaryotes 544 6.57e-150   NTclustered gi|166303|gb|J05116.1|ACKCAL 4767 g7200 i0 88.326 89.1629778672032 454 51 91 2 14 466 493 945 A.klebsiana calmodulin gene, complete cds blastn 44314 544 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya klebsiana
13970577 13970577 PRJNA796753_P_NODE_13771_length_381_cov_2.000000_g13459_i0 PRJNA796753 13771 381 2 7.62 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 58.4 7.81e-4   NTclustered gi|169305|gb|M83535.1|PHTCALPIA 4787 g13459 i0 100 1.27296587926509 31 0 8 0 351 381 1171 1141 P.infestans calmodulin (calA) gene, complete cds blastn 485 58.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
18632265 18632265 PRJNA796753_P_NODE_4935_length_606_cov_1.515947_g4629_i0 PRJNA796753 4935 606 1.515947 9.18663882 Saprolegnia diclina 112098 SAR_Eukaryotes SAR_Eukaryotes 209 3.37e-49   NTclustered gi|669167679|ref|XM_008621180.1| 1156394 g4629 i0 81.041 5.4009900990099 269 45 44 6 32 297 456 721 Saprolegnia diclina VS20 30S ribosomal protein SAe mRNA blastn 3273 209 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
19907484 19907484 PRJNA796753_P_NODE_28956_length_283_cov_2.233333_g28644_i0 PRJNA796753 28956 283 2.233333 6.32033239 Saprolegnia parasitica 101203 SAR_Eukaryotes SAR_Eukaryotes 134 9.07e-27   NTclustered gi|813163222|ref|XM_012347282.1| 695850 g28644 i0 79.679 10.1484098939929 187 36 66 2 92 277 323 138 Saprolegnia parasitica CBS 223.65 translation initiation factor eIF-5A mRNA blastn 2872 134 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
21183226 21183226 PRJNA796753_P_NODE_42937_length_249_cov_0.875000_g42625_i0 PRJNA796753 42937 249 0.875 2.17875 Saprolegnia diclina 112098 SAR_Eukaryotes SAR_Eukaryotes 215 2.72e-51   NTclustered gi|669155015|ref|XM_008614848.1| 1156394 g42625 i0 83.621 83.5622489959839 232 35 92 3 1 229 263 32 Saprolegnia diclina VS20 actin mRNA blastn 20807 215 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
21618810 21618810 PRJNA796753_P_NODE_31977_length_273_cov_1.700000_g31665_i0 PRJNA796753 31977 273 1.7 4.641 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 267 8.219999999999999e-67   NTclustered gi|2795048880|ref|XM_067943659.1| 4785 g31665 i0 84.502 73.9304029304029 271 40 99 2 1 270 69 338 Phytophthora cinnamomi Calmodulin (IUM83_18649), partial mRNA blastn 20183 267 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
22457754 22457754 PRJNA796753_P_NODE_16698_length_353_cov_1.100000_g16386_i0 PRJNA796753 16698 353 1.1 3.883 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 287 8.410000000000001e-73   NTclustered gi|2795041536|ref|XM_067930708.1| 4785 g16386 i0 81.844 5.61756373937677 347 57 97 6 10 353 1005 662 Phytophthora cinnamomi NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (IUM83_06496), partial mRNA blastn 1983 287 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
22457756 22457756 PRJNA796753_P_NODE_16838_length_351_cov_7.859712_g16526_i0 PRJNA796753 16838 351 7.859712 27.58758912 Pythium torulosum 4799 SAR_Eukaryotes SAR_Eukaryotes 150 1.1399999999999999e-31   NTclustered gi|1780534029|gb|MK753000.1| 4799 g16526 i0 89.744 28.8547008547009 117 12 33 0 1 117 1205 1321 Pythium torulosum isolate MISO_8-29.1 beta-tubulin mRNA, complete cds blastn 10128 150 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium torulosum
25007050 25007050 PRJNA796753_P_NODE_1960_length_915_cov_2.808789_g1723_i0 PRJNA796753 1960 915 2.808789 25.70041935 Phytophthora ramorum 164328 SAR_Eukaryotes SAR_Eukaryotes 435 7.86e-117   NTclustered gi|2794882649|ref|XM_067895061.1| 164328 g1723 i0 82.157 55.0950819672131 510 87 56 4 76 583 37 544 Phytophthora ramorum ADP-ribosylation factor (KRP23_969), partial mRNA blastn 50412 435 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
25007212 25007212 PRJNA796753_P_NODE_47520_length_245_cov_1.790698_g47208_i0 PRJNA796753 47520 245 1.790698 4.3872101 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 108 4.65e-19   NTclustered gi|301114940|ref|XM_002999194.1| 403677 g47208 i0 77.778 0.971428571428571 180 36 73 4 1 178 770 593 Phytophthora infestans T30-4 pyrophosphate-energized vacuolar membrane proton pump, putative (PITG_05615), partial mRNA blastn 238 108 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
25443405 25443405 PRJNA796753_P_NODE_19540_length_332_cov_2.270270_g19228_i0 PRJNA796753 19540 332 2.27027 7.5372964 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 204 8.159999999999998e-48   NTclustered gi|695460914|ref|XM_009539807.1| 67593 g19228 i0 89.441 45.9367469879518 161 17 48 0 1 161 198 358 Phytophthora sojae hypothetical protein mRNA blastn 15251 204 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;