RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA796753" and tax_phylum = "Nemertea"

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tax_superkingdom 1

tax_phylum 1

  • Nemertea · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA796753 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3331712 3331712 PRJNA796753_P_NODE_20543_length_326_cov_1.185771_g20231_i0 PRJNA796753 20543 326 1.185771 3.86561346 Lineus longissimus 88925 Nemertea other_Eukaryota 67.6 1.09e-6   NTclustered gi|2724535198|ref|XM_064775507.1| 88925 g20231 i0 82.927 0.739263803680982 82 7 24 6 241 317 759 680 PREDICTED: Lineus longissimus vesicle-associated membrane protein 7-like (LOC135489891), transcript variant X1, mRNA blastn 241 67.6 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
18632267 18632267 PRJNA796753_P_NODE_4955_length_604_cov_8.546139_g4649_i0 PRJNA796753 4955 604 8.546139 51.61867956 Lineus viridis 56195 Nemertea other_Eukaryota 171 1.58e-37   NTclustered gi|166952326|gb|EU302557.1| 56195 g4649 i0 77.941 11.7086092715232 272 60 45 0 245 516 289 18 Lineus viridis ribosomal protein rpl37a mRNA, complete cds blastn 7072 171 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus viridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;