RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA796753" and tax_phylum = "Echinodermata"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 13 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA796753 · 13 ✖

analysis 1

  • blastn · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3331805 3331805 PRJNA796753_P_NODE_3623_length_699_cov_10.910543_g3334_i0 PRJNA796753 3623 699 10.910543 76.26469557 Diadema antillarum 105358 Echinodermata other_Eukaryota 331 8.01e-86   NTclustered gi|2919435354|ref|XM_071637819.1| 105358 g3334 i0 79.825 50.4306151645207 456 90 65 2 14 468 32 486 PREDICTED: Diadema antillarum ubiquitin-ribosomal protein eS31 fusion protein (LOC139726824), mRNA blastn 35251 331 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
4608992 4608992 PRJNA796753_P_NODE_19724_length_331_cov_1.461240_g19412_i0 PRJNA796753 19724 331 1.46124 4.8367044 Patiria miniata 46514 Echinodermata other_Eukaryota 202 2.92e-47   NTclustered gi|1944939444|ref|XM_038189959.1| 46514 g19412 i0 78.37 0.963746223564955 319 63 95 6 1 316 601 916 PREDICTED: Patiria miniata cilia- and flagella-associated protein 157-like (LOC119720318), mRNA blastn 319 202 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
5884164 5884164 PRJNA796753_P_NODE_25185_length_299_cov_1.362832_g24873_i0 PRJNA796753 25185 299 1.362832 4.07486768 Patiria miniata 46514 Echinodermata other_Eukaryota 58.4 5.98e-4   NTclustered gi|1944936574|ref|XM_038188521.1| 46514 g24873 i0 89.362 0.62876254180602 47 3 15 2 44 89 1159 1204 PREDICTED: Patiria miniata band 4.1-like protein 5 (LOC119719174), transcript variant X1, mRNA blastn 188 58.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
7159046 7159046 PRJNA796753_P_NODE_24726_length_302_cov_1.008734_g24414_i0 PRJNA796753 24726 302 1.008734 3.04637668 Anneissia japonica 1529436 Echinodermata other_Eukaryota 243 1.55e-59   NTclustered gi|1826629109|ref|XM_033247205.1| 1529436 g24414 i0 81.333 19.6754966887417 300 54 99 2 2 300 802 1100 PREDICTED: Anneissia japonica 26S proteasome regulatory subunit 6B (LOC117105901), mRNA blastn 5942 243 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
8433800 8433800 PRJNA796753_P_NODE_30447_length_278_cov_1.878049_g30135_i0 PRJNA796753 30447 278 1.878049 5.22097622 Patiria miniata 46514 Echinodermata other_Eukaryota 189 1.87e-43   NTclustered gi|1944938040|ref|XM_038189225.1| 46514 g30135 i0 87.654 39.3525179856115 162 20 58 0 2 163 1075 914 PREDICTED: Patiria miniata guanine nucleotide-binding protein alpha-2 subunit-like (LOC119719727), mRNA blastn 10940 189 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
9709095 9709095 PRJNA796753_P_NODE_7728_length_491_cov_1.825359_g7417_i0 PRJNA796753 7728 491 1.825359 8.96251269 Asterias rubens 7604 Echinodermata other_Eukaryota 215 5.77e-51   NTclustered gi|1834292503|ref|XM_033789944.1| 7604 g7417 i0 78.274 20.050916496945 336 71 68 2 80 414 127 461 PREDICTED: Asterias rubens 60S ribosomal protein L27a-like (LOC117305153), mRNA blastn 9845 215 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
10984669 10984669 PRJNA796753_P_NODE_3269_length_733_cov_16.412121_g2986_i0 PRJNA796753 3269 733 16.412121 120.30084693 Acanthaster planci 133434 Echinodermata other_Eukaryota 401 6.329999999999999e-107   NTclustered gi|1229182411|ref|XM_022249129.1| 133434 g2986 i0 82.43 82.3888130968622 461 79 63 2 220 679 526 67 PREDICTED: Acanthaster planci ubiquitin-40S ribosomal protein S27a (LOC110986865), mRNA blastn 60391 401 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
13534473 13534473 PRJNA796753_P_NODE_48551_length_245_cov_0.895349_g48239_i0 PRJNA796753 48551 245 0.895349 2.19360505 Patiria miniata 46514 Echinodermata other_Eukaryota 60.2 1.32e-4   NTclustered gi|1944902792|ref|XM_038208151.1| 46514 g48239 i0 97.222 0.502040816326531 36 0 15 1 89 124 1067 1101 PREDICTED: Patiria miniata putative uncharacterized protein DDB_G0271606 (LOC119734615), mRNA blastn 123 60.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
16083122 16083122 PRJNA796753_P_NODE_1313_length_1072_cov_4.856857_g1127_i0 PRJNA796753 1313 1072 4.856857 52.06550704 Diadema antillarum 105358 Echinodermata other_Eukaryota 183 3.699999999999999e-41   NTclustered gi|2919509818|ref|XM_071651395.1| 105358 g1127 i0 91.111 12.6315298507463 135 12 13 0 938 1072 416 282 PREDICTED: Diadema antillarum histone H3, embryonic (LOC139740824), mRNA blastn 13541 183 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
21183313 21183313 PRJNA796753_P_NODE_54957_length_235_cov_2.432099_g54645_i0 PRJNA796753 54957 235 2.432099 5.71543265 Patiria miniata 46514 Echinodermata other_Eukaryota 84.2 7.47e-12   NTclustered gi|1944859319|ref|XM_038195795.1| 46514 g54645 i0 77.059 3.37021276595745 170 24 77 10 12 178 1401 1244 PREDICTED: Patiria miniata aspartyl/asparaginyl beta-hydroxylase-like (LOC119724648), mRNA blastn 792 84.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
22457981 22457981 PRJNA796753_P_NODE_5398_length_581_cov_3.765748_g5091_i0 PRJNA796753 5398 581 3.765748 21.87899588 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 183 1.95e-41   NTclustered gi|1752399365|ref|XM_011667624.2| 7668 g5091 i0 83.59 38.7538726333907 195 32 34 0 130 324 583 389 PREDICTED: Strongylocentrotus purpuratus ATP synthase F(0) complex subunit C2, mitochondrial (LOC583818), mRNA blastn 22516 183 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
22894368 22894368 PRJNA796753_P_NODE_49918_length_244_cov_0.900585_g49606_i0 PRJNA796753 49918 244 0.900585 2.1974274 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 54.7 0.006   NTclustered gi|1944913393|ref|XM_038213593.1| 46514 g49606 i0 100 2.9672131147541 29 0 12 0 49 77 1135 1163 PREDICTED: Patiria miniata septin-7-like (LOC119738680), transcript variant X2, mRNA blastn 724 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
25007261 25007261 PRJNA796753_P_NODE_5600_length_571_cov_1.353414_g5292_i0 PRJNA796753 5600 571 1.353414 7.72799394 Patiria miniata 46514 Echinodermata other_Eukaryota 224 1.13e-53   NTclustered gi|1944923555|ref|XM_038218481.1| 46514 g5292 i0 80.836 29.3905429071804 287 53 50 2 1 286 1973 2258 PREDICTED: Patiria miniata major vault protein-like (LOC119742522), mRNA blastn 16782 224 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;