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contig_metadata

25 rows where analysis = "blastn", bioproject = "PRJNA796753" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 25 ✖

tax_clade 1

bioproject 1

  • PRJNA796753 · 25 ✖

analysis 1

  • blastn · 25 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2056549 2056549 PRJNA796753_P_NODE_21582_length_319_cov_2.113821_g21270_i0 PRJNA796753 21582 319 2.113821 6.74308899 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 460 4.19e-125   NTclustered gi|300078498|gb|GU001160.1| 5755 g21270 i0 93.103 41.2789968652038 319 15 99 4 1 315 7503 7818 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 13168 460 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
2056576 2056576 PRJNA796753_P_NODE_2582_length_821_cov_4.981283_g2316_i0 PRJNA796753 2582 821 4.981283 40.89633343 Vexillifera expectata 1789827 Discosea other_Eukaryota 516 2.44e-141   NTclustered gi|1042160943|dbj|LC102278.1| 1789827 g2316 i0 92.077 42.6869671132765 366 29 45 0 456 821 724 359 Vexillifera expectata gene for elongation factor 2 alpha, partial cds, strain: 4730 blastn 35046 516 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera expectata
2056751 2056751 PRJNA796753_P_NODE_6742_length_523_cov_1.448889_g6433_i0 PRJNA796753 6742 523 1.448889 7.57768947 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 390 9.57e-104   NTclustered gi|470416430|ref|XM_004336836.1| 1257118 g6433 i0 80.303 97.414913957935 528 94 100 6 1 523 681 159 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_130960), partial mRNA blastn 50948 390 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
2492054 2492054 PRJNA796753_P_NODE_13462_length_385_cov_0.987179_g13150_i0 PRJNA796753 13462 385 0.987179 3.80063915 Acanthamoeba 5754 Discosea other_Eukaryota 442 1.8699999999999993e-119   NTclustered gi|881634|gb|U29610.1|ACU29610 5755 g13150 i0 88.705 53.4103896103896 363 39 94 2 24 385 293 654 Acanthaoeba castellanii actin-related protein 3 Arp3 mRNA, complete cds blastn 20563 442 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
3331789 3331789 PRJNA796753_P_NODE_34623_length_265_cov_1.109375_g34311_i0 PRJNA796753 34623 265 1.109375 2.93984375 Platyamoeba placida 3454475 Discosea other_Eukaryota 279 1.02e-70   NTclustered gi|33946348|gb|AY294153.1| 197527 g34311 i0 91.96 86.1094339622641 199 16 75 0 1 199 984 1182 Platyamoeba placida actin mRNA, partial cds blastn 22819 279 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
4609044 4609044 PRJNA796753_P_NODE_30084_length_280_cov_1.115942_g29772_i0 PRJNA796753 30084 280 1.115942 3.1246376 Vannella mustalahtiana 2841357 Discosea other_Eukaryota 468 2.16e-127   NTclustered gi|2047416623|gb|MZ329078.1| 2841357 g29772 i0 96.797 100.910714285714 281 8 100 1 1 280 391 111 Vannella sp. AKud-2021a clone NGD3297 small subunit ribosomal RNA gene, partial sequence blastn 28255 468 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella mustalahtiana
5884122 5884122 PRJNA796753_P_NODE_16325_length_356_cov_1.289753_g16013_i0 PRJNA796753 16325 356 1.289753 4.59152068 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 623 5.689999999999999e-174   NTclustered gi|659103923|gb|KJ569725.1| 1512276 g16013 i0 98.315 76.2780898876404 356 5 100 1 1 356 581 227 Cochliopodium kieliense clone 9601 18S ribosomal RNA gene, partial sequence blastn 27155 623 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense
7159034 7159034 PRJNA796753_P_NODE_23626_length_308_cov_1.102128_g23314_i0 PRJNA796753 23626 308 1.102128 3.39455424 Mayorella sp. JJP-2003 242541 Discosea other_Eukaryota 381 3.2299999999999995e-101   NTclustered gi|33946346|gb|AY294152.1| 242541 g23314 i0 88.961 83.1948051948052 308 34 100 0 1 308 961 654 Mayorella sp. JJP-2003 actin mRNA, partial cds blastn 25624 381 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Mayorella Mayorella sp. JJP-2003
7159104 7159104 PRJNA796753_P_NODE_35426_length_262_cov_1.312169_g35114_i0 PRJNA796753 35426 262 1.312169 3.43788278 Paramoeba branchiphila 308475 Discosea other_Eukaryota 178 3.78e-40   NTclustered gi|226347442|gb|FJ807261.1| 308475 g35114 i0 79.087 80.8053435114504 263 51 99 4 2 262 955 695 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 21171 178 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
7159191 7159191 PRJNA796753_P_NODE_47866_length_245_cov_0.895349_g47554_i0 PRJNA796753 47866 245 0.895349 2.19360505 Dermamoebida sp. 2959661 Discosea other_Eukaryota 399 6.859999999999999e-107   NTclustered gi|2270840643|gb|ON979785.1| 2959661 g47554 i0 95.968 44.1918367346939 248 7 100 3 1 245 241 488 Dermamoebida sp. strain 1 small subunit ribosomal RNA gene, partial sequence blastn 10827 399 1 Eukaryota Amoebozoa   Discosea   Longamoebia     Dermamoebida sp.
7159269 7159269 PRJNA796753_P_NODE_9426_length_450_cov_1.347480_g9114_i0 PRJNA796753 9426 450 1.34748 6.06366 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 568 3.499999999999999e-157   NTclustered gi|300078498|gb|GU001160.1| 5755 g9114 i0 89.574 14.2555555555556 470 17 100 19 1 450 5401 5858 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 6415 568 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8433724 8433724 PRJNA796753_P_NODE_19127_length_335_cov_1.488550_g18815_i0 PRJNA796753 19127 335 1.48855 4.9866425 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 265 3.73e-66   NTclustered gi|470528557|ref|XM_004367868.1| 1257118 g18815 i0 81.009 10.0925373134328 337 60 100 4 1 335 13 347 Acanthamoeba castellanii str. Neff ribosomal protein S8e, putative (ACA1_288920), partial mRNA blastn 3381 265 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8433732 8433732 PRJNA796753_P_NODE_20787_length_324_cov_1.872510_g20475_i0 PRJNA796753 20787 324 1.87251 6.0669324 Platyamoeba placida 3454475 Discosea other_Eukaryota 438 2e-118   NTclustered gi|33946348|gb|AY294153.1| 197527 g20475 i0 91.049 100.055555555556 324 29 100 0 1 324 871 548 Platyamoeba placida actin mRNA, partial cds blastn 32418 438 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
9708817 9708817 PRJNA796753_P_NODE_13148_length_388_cov_1.615873_g12836_i0 PRJNA796753 13148 388 1.615873 6.26958724 Vannella planctonica 1678069 Discosea other_Eukaryota 701 0   NTclustered gi|861554250|gb|KP719193.1| 1678069 g12836 i0 99.227 95.069587628866 388 3 100 0 1 388 1061 674 Vannella planctonica strain A2FBB small subunit ribosomal RNA gene, partial sequence blastn 36887 701 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella planctonica
10145182 10145182 PRJNA796753_P_NODE_32888_length_270_cov_4.218274_g32576_i0 PRJNA796753 32888 270 4.218274 11.3893398 Acanthamoeba 5754 Discosea other_Eukaryota 499 7.349999999999998e-137   NTclustered gi|2044079968|gb|MZ272159.1| 5756 g32576 i0 100 100.97037037037 270 0 100 0 1 270 1480 1211 Acanthamoeba sp. isolate AcWT29 small subunit ribosomal RNA gene, partial sequence blastn 27262 499 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba sp.
10984850 10984850 PRJNA796753_P_NODE_8569_length_469_cov_0.972222_g8258_i0 PRJNA796753 8569 469 0.972222 4.55972118 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 259 2.5e-64   NTclustered gi|470491310|ref|XM_004345828.1| 1257118 g8258 i0 79.42 2.95735607675906 379 68 80 10 24 397 670 1043 Acanthamoeba castellanii str. Neff argininosuccinate lyase, putative (ACA1_182360), partial mRNA blastn 1387 259 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
12260367 12260367 PRJNA796753_P_NODE_7190_length_507_cov_2.569124_g6881_i0 PRJNA796753 7190 507 2.569124 13.02545868 Vannella simplex 197532 Discosea other_Eukaryota 887 0   NTclustered gi|861554709|gb|KP719198.1| 197532 g6881 i0 97.83 90.5285996055227 507 11 100 0 1 507 33 539 Vannella simplex strain A1SMB small subunit ribosomal RNA gene, partial sequence blastn 45898 887 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella simplex
13534549 13534549 PRJNA796753_P_NODE_8251_length_478_cov_1.091358_g7940_i0 PRJNA796753 8251 478 1.091358 5.21669124 Vannella simplex 197532 Discosea other_Eukaryota 778 0   NTclustered gi|284192609|gb|GQ265407.1| 197532 g7940 i0 96.066 99.1715481171548 483 10 100 8 1 478 320 798 Vannella simplex strain L4A Cl 4/1/2 clone A147.4 18S ribosomal RNA gene, partial sequence blastn 47404 778 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella simplex
14809203 14809203 PRJNA796753_P_NODE_22292_length_315_cov_1.842975_g21980_i0 PRJNA796753 22292 315 1.842975 5.80537125 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 366 9.27e-97   NTclustered gi|300078498|gb|GU001160.1| 5755 g21980 i0 87.888 15.6920634920635 322 25 100 13 1 315 6746 7060 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 4943 366 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14809294 14809294 PRJNA796753_P_NODE_3612_length_701_cov_1.477707_g3323_i0 PRJNA796753 3612 701 1.477707 10.35872607 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 568 5.619999999999998e-157   NTclustered gi|470450828|ref|XM_004340382.1| 1257118 g3323 i0 81.831 83.6305278174037 688 113 97 10 1 682 877 196 Acanthamoeba castellanii str. Neff elongation factor 1alpha, somatic form, putative (ACA1_138040), partial mRNA blastn 58625 568 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18632176 18632176 PRJNA796753_P_NODE_35535_length_261_cov_6.930851_g35223_i0 PRJNA796753 35535 261 6.930851 18.08952111 Mayorella sp. JJP-2003 242541 Discosea other_Eukaryota 289 1.67e-73   NTclustered gi|33946346|gb|AY294152.1| 242541 g35223 i0 89.474 84.0689655172414 228 24 87 0 1 228 265 38 Mayorella sp. JJP-2003 actin mRNA, partial cds blastn 21942 289 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Mayorella Mayorella sp. JJP-2003
19907466 19907466 PRJNA796753_P_NODE_25076_length_300_cov_1.074890_g24764_i0 PRJNA796753 25076 300 1.07489 3.22467 Ripella sp. 1973050 Discosea other_Eukaryota 307 5.39e-79   NTclustered gi|2666517890|gb|PP259001.1| 1973050 g24764 i0 86.242 68.3733333333333 298 23 98 12 1 294 176 459 Ripella sp. strain CHIESE60 small subunit ribosomal RNA gene, partial sequence blastn 20512 307 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp.
25007211 25007211 PRJNA796753_P_NODE_47140_length_246_cov_0.890173_g46828_i0 PRJNA796753 47140 246 0.890173 2.18982558 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 161 3.54e-35   NTclustered gi|470456539|ref|XM_004341020.1| 1257118 g46828 i0 82.609 5.19512195121951 184 30 74 2 1 183 300 482 Acanthamoeba castellanii str. Neff polyadenylate-binding protein family protein (ACA1_234620), partial mRNA blastn 1278 161 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
25007235 25007235 PRJNA796753_P_NODE_5060_length_599_cov_1.212928_g4753_i0 PRJNA796753 5060 599 1.212928 7.26543872 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 453 1.39e-122   NTclustered gi|470421609|ref|XM_004337363.1| 1257118 g4753 i0 81.424 80.881469115192 576 88 95 15 27 594 789 225 Acanthamoeba castellanii str. Neff Enolase, Cterminal TIM barrel domain containing protein (ACA1_275720), partial mRNA blastn 48448 453 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
25443416 25443416 PRJNA796753_P_NODE_22920_length_312_cov_0.974895_g22608_i0 PRJNA796753 22920 312 0.974895 3.0416724 Vannellidae 95227 Discosea other_Eukaryota 228 4.519999999999999e-55   NTclustered gi|62865947|gb|AY929922.1| 325065 g22608 i0 85.202 72.3557692307692 223 31 71 2 92 312 1450 1672 Platyamoeba sp. strain CAZ7/I 18S small subunit ribosomal RNA gene, partial sequence blastn 22575 230 0.991304347826087 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba sp. strain CAZ7/I

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;