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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA796753" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA796753 · 12 ✖

analysis 1

  • blastn · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
780570 780570 PRJNA796753_P_NODE_13861_length_380_cov_2.475570_g13549_i0 PRJNA796753 13861 380 2.47557 9.407166 Polychytrium aggregatum 110093 Fungi Fungi 195 5.69e-45   NTclustered gi|2432132411|ref|XM_053109501.1| 110093 g13549 i0 81.974 17.2789473684211 233 38 61 4 125 355 1162 932 Polychytrium aggregatum ribosomal protein L3-domain-containing protein (BJ171DRAFT_489537), mRNA blastn 6566 195 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
3331691 3331691 PRJNA796753_P_NODE_1723_length_966_cov_3.276596_g1511_i0 PRJNA796753 1723 966 3.276596 31.65191736 Fimicolochytrium jonesii 1396493 Fungi Fungi 590 1.68e-163   NTclustered gi|2432080769|ref|XM_053070516.1| 1396493 g1511 i0 79.741 89.7919254658385 849 145 86 21 67 900 1050 214 Fimicolochytrium jonesii mitochondrial carrier domain-containing protein (EV422DRAFT_532223), mRNA blastn 86739 590 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
3331870 3331870 PRJNA796753_P_NODE_46823_length_246_cov_0.890173_g46511_i0 PRJNA796753 46823 246 0.890173 2.18982558 Fimicolochytrium jonesii 1396493 Fungi Fungi 255 1.58e-63   NTclustered gi|2432058057|ref|XM_053065681.1| 1396493 g46511 i0 88.571 85.5528455284553 210 24 85 0 1 210 571 362 Fimicolochytrium jonesii actin family protein (EV422DRAFT_244165), mRNA blastn 21046 255 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
8434004 8434004 PRJNA796753_P_NODE_9327_length_452_cov_1.625330_g9015_i0 PRJNA796753 9327 452 1.62533 7.3464916 Rhizophydium brooksianum 324673 Fungi Fungi 243 2.4200000000000008e-59   NTclustered gi|1399223987|ref|NG_060069.1| 324673 g9015 i0 77.007 102.152654867257 461 83 100 21 1 452 1979 1533 Rhizophydium brooksianum JEL 136 28S rRNA gene, partial sequence; from reference material blastn 46173 243 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Rhizophydiaceae Rhizophydium Rhizophydium brooksianum
13534301 13534301 PRJNA796753_P_NODE_22211_length_316_cov_0.950617_g21899_i0 PRJNA796753 22211 316 0.950617 3.00394972 Synchytrium microbalum 1806994 Fungi Fungi 159 1.69e-34   NTclustered gi|1759154818|ref|XM_031169817.1| 1806994 g21899 i0 94.231 49.5791139240506 104 6 37 0 1 104 337 440 Synchytrium microbalum uncharacterized protein (SmJEL517_g03889), partial mRNA blastn 15667 159 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum
13534417 13534417 PRJNA796753_P_NODE_40771_length_250_cov_0.870056_g40459_i0 PRJNA796753 40771 250 0.870056 2.17514 Polychytrium aggregatum 110093 Fungi Fungi 320 5.62e-83   NTclustered gi|2432166554|ref|XM_053112251.1| 110093 g40459 i0 89.919 95.488 248 25 99 0 3 250 1360 1113 Polychytrium aggregatum P-loop containing nucleoside triphosphate hydrolase protein (BJ171DRAFT_518510), mRNA blastn 23872 320 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
18632097 18632097 PRJNA796753_P_NODE_1975_length_913_cov_14.217857_g1737_i0 PRJNA796753 1975 913 14.217857 129.80903441 Polychytrium aggregatum 110093 Fungi Fungi 411 1.32e-109   NTclustered gi|1866582609|gb|MT730784.1| 110093 g1737 i0 77.688 80.6527929901424 744 118 79 35 190 913 5203 4488 Polychytrium aggregatum isolate JEL0700 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 73636 411 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
19907390 19907390 PRJNA796753_P_NODE_12196_length_401_cov_1.701220_g11884_i0 PRJNA796753 12196 401 1.70122 6.8218922 Polychytrium aggregatum 110093 Fungi Fungi 215 4.63e-51   NTclustered gi|2432155690|ref|XM_053111537.1| 110093 g11884 i0 77.746 3.06234413965087 355 75 88 4 49 401 1344 992 Polychytrium aggregatum mitochondrial carrier domain-containing protein (BJ171DRAFT_511047), mRNA blastn 1228 215 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
21183202 21183202 PRJNA796753_P_NODE_37337_length_255_cov_1.692308_g37025_i0 PRJNA796753 37337 255 1.692308 4.3153854 Polychytrium aggregatum 110093 Fungi Fungi 195 3.64e-45   NTclustered gi|2432130882|ref|XM_053113780.1| 110093 g37025 i0 81.781 2.09019607843137 247 31 94 12 16 255 618 857 Polychytrium aggregatum Thi4 family-domain-containing protein (BJ171DRAFT_576963), partial mRNA blastn 533 195 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
22457779 22457779 PRJNA796753_P_NODE_19838_length_330_cov_1.797665_g19526_i0 PRJNA796753 19838 330 1.797665 5.9322945 Fimicolochytrium jonesii 1396493 Fungi Fungi 176 1.77e-39   NTclustered gi|2432111638|ref|XM_053071593.1| 1396493 g19526 i0 77.891 16.6 294 57 88 8 17 306 471 760 Fimicolochytrium jonesii 40S ribosomal protein S2 (EV422DRAFT_547289), mRNA blastn 5478 176 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
22458007 22458007 PRJNA796753_P_NODE_7978_length_484_cov_3.798054_g7667_i0 PRJNA796753 7978 484 3.798054 18.38258136 Neocallimastix sp. GE13 324672 Fungi Fungi 342 2.5e-89   NTclustered gi|82792153|gb|DQ282608.1| 324672 g7667 i0 80.617 92.5847107438017 454 78 93 7 1 452 81 526 Neocallimastix sp. GE13 isolate AFTOL-ID 638 elongation factor 1-alpha (EF1-alpha) gene, partial cds blastn 44811 342 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Neocallimastix Neocallimastix sp. GE13
25007002 25007002 PRJNA796753_P_NODE_11460_length_412_cov_1.448378_g11148_i0 PRJNA796753 11460 412 1.448378 5.96731736 Polychytrium aggregatum 110093 Fungi Fungi 233 1.32e-56   NTclustered gi|2432171462|ref|XM_053112561.1| 110093 g11148 i0 80.259 60.5776699029126 309 61 75 0 80 388 2146 1838 Polychytrium aggregatum heat shock protein 90 kDa (BJ171DRAFT_524257), mRNA blastn 24958 233 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;