RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA796753" and tax_phylum = "Annelida"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Annelida · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA796753 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3331899 3331899 PRJNA796753_P_NODE_50243_length_244_cov_0.900585_g49931_i0 PRJNA796753 50243 244 0.900585 2.1974274 Hirudo verbana 311461 Annelida Annelida 73.1 1.69e-8   NTclustered gi|2918369702|emb|OZ237787.1| 311461 g49931 i0 91.071 19.6270491803279 56 1 26 4 69 122 3028542 3028595 Hirudo verbana genome assembly, chromosome: 9 blastn 4789 73.1 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
6320789 6320789 PRJNA796753_P_NODE_54365_length_241_cov_0.916667_g54053_i0 PRJNA796753 54365 241 0.916667 2.20916747 Carpetania 2837876 Annelida Annelida 446 8.519999999999999e-121   NTclustered gi|150248439|gb|EF653875.1| 452200 g54053 i0 100 99.9294605809129 241 0 100 0 1 241 288 48 Hormogaster elisae haplotype MOL2 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial blastn 24083 446 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Hormogastridae Carpetania Carpetania elisae
12260280 12260280 PRJNA796753_P_NODE_44290_length_248_cov_0.880000_g43978_i0 PRJNA796753 44290 248 0.88 2.1824 Hirudo verbana 311461 Annelida Annelida 56.5 0.002   NTclustered gi|2918369621|emb|OZ237783.1| 311461 g43978 i0 96.97 0.971774193548387 33 1 13 0 208 240 2271549 2271581 Hirudo verbana genome assembly, chromosome: 5 blastn 241 56.5 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
14809202 14809202 PRJNA796753_P_NODE_22232_length_316_cov_0.860082_g21920_i0 PRJNA796753 22232 316 0.860082 2.71785912 Hirudo verbana 311461 Annelida Annelida 60.2 1.77e-4   NTclustered gi|2918369614|emb|OZ237780.1| 311461 g21920 i0 92.683 1.77215189873418 41 3 13 0 11 51 1915468 1915508 Hirudo verbana genome assembly, chromosome: 2 blastn 560 60.2 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
14809347 14809347 PRJNA796753_P_NODE_45152_length_247_cov_0.885057_g44840_i0 PRJNA796753 45152 247 0.885057 2.18609079 Helobdella robusta 6412 Annelida Annelida 52.8 0.022   NTclustered gi|675880059|ref|XM_009027299.1| 6412 g44840 i0 100 0.11336032388664 28 0 11 0 37 64 678 705 Helobdella robusta hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
25007053 25007053 PRJNA796753_P_NODE_20560_length_326_cov_1.007905_g20248_i0 PRJNA796753 20560 326 1.007905 3.2857703 Aporrectodea georgii 1302592 Annelida Annelida 189 2.2399999999999992e-43   NTclustered gi|674656370|gb|KJ912280.1| 1302592 g20248 i0 79.478 44.6104294478528 268 53 82 2 8 274 788 522 Aporrectodea georgii isolate MPL413 NADH dehydrogenase subunit 1 (ND1) gene, partial cds; mitochondrial blastn 14543 189 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Lumbricidae Aporrectodea Aporrectodea georgii

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;