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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA796753" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 14 ✖

bioproject 1

  • PRJNA796753 · 14 ✖

analysis 1

  • blastn · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3331658 3331658 PRJNA796753_P_NODE_11763_length_407_cov_1.832335_g11451_i0 PRJNA796753 11763 407 1.832335 7.45760345 Chlamydomonas reinhardtii 3055 Plants Plants 195 6.13e-45   NTclustered gi|2082260551|ref|XM_001702928.2| 3055 g11451 i0 82.301 2.56265356265356 226 38 55 2 135 359 159 383 Chlamydomonas reinhardtii ribosomal protein S11 (CHLRE_12g514500v5), mRNA blastn 1043 195 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
3768354 3768354 PRJNA796753_P_NODE_19003_length_336_cov_1.262357_g18691_i0 PRJNA796753 19003 336 1.262357 4.24151952 Eukaryota 2759 Plants Plants 309 1.7e-79   NTclustered gi|18243|emb|X60826.1| 3055 g18691 i0 85.862 179.651785714286 290 41 86 0 45 334 392 103 C.reinhardtii UBI3 mRNA for ubiquitin-fusion protein (UbCEP52) blastn 60363 311 0.993569131832797 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
3768418 3768418 PRJNA796753_P_NODE_3763_length_687_cov_4.114007_g3470_i0 PRJNA796753 3763 687 4.114007 28.26322809 Eukaryota 2759 Plants Plants 660 0   NTclustered gi|2082244282|ref|XM_001703058.2| 3055 g3470 i0 85.226 85.7278020378457 643 93 93 2 46 687 563 1204 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_04g216850v5), mRNA blastn 58895 660 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
7594806 7594806 PRJNA796753_P_NODE_28346_length_285_cov_2.174528_g28034_i0 PRJNA796753 28346 285 2.174528 6.1974048 Eukaryota 2759 Plants Plants 250 8.699999999999999e-62   NTclustered gi|371782091|emb|HE610123.1| 3107 g28034 i0 91.398 65.9263157894737 186 10 65 5 66 250 5126 4946 Hydrodictyon reticulatum 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain M2243 blastn 18789 250 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Hydrodictyaceae Hydrodictyon Hydrodictyon reticulatum
8433766 8433766 PRJNA796753_P_NODE_25187_length_299_cov_1.362832_g24875_i0 PRJNA796753 25187 299 1.362832 4.07486768 Chlamydomonas reinhardtii 3055 Plants Plants 204 7.249999999999999e-48   NTclustered gi|2082240135|ref|XM_001699602.2| 3055 g24875 i0 83.26 16.4013377926421 227 32 75 6 62 285 298 75 Chlamydomonas reinhardtii ribosomal protein L27a (CHLRE_02g115200v5), mRNA blastn 4904 204 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
8433784 8433784 PRJNA796753_P_NODE_27667_length_288_cov_1.027907_g27355_i0 PRJNA796753 27667 288 1.027907 2.96037216 Chlorella variabilis 554065 Plants Plants 156 1.97e-33   NTclustered gi|552839912|ref|XM_005849855.1| 554065 g27355 i0 85.43 11.3298611111111 151 20 52 2 139 288 586 437 Chlorella variabilis hypothetical protein (CHLNCDRAFT_56085) mRNA, complete cds blastn 3263 156 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
10984553 10984553 PRJNA796753_P_NODE_1529_length_1008_cov_3.659893_g1327_i0 PRJNA796753 1529 1008 3.659893 36.89172144 Chlamydomonas reinhardtii 3055 Plants Plants 425 5.23e-114   NTclustered gi|2082263148|ref|XM_001693658.2| 3055 g1327 i0 78.066 31.2688492063492 693 138 68 12 1 683 36 724 Chlamydomonas reinhardtii ribosomal protein S3a (CHLRE_13g568650v5), mRNA blastn 31519 425 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
10984855 10984855 PRJNA796753_P_NODE_9129_length_456_cov_4.391645_g8817_i0 PRJNA796753 9129 456 4.391645 20.0259012 Monoraphidium neglectum 145388 Plants Plants 220 1.15e-52   NTclustered gi|926796681|ref|XM_014050626.1| 145388 g8817 i0 81.455 37.5482456140351 275 45 60 6 43 314 38 309 Monoraphidium neglectum 60S ribosomal protein L30 mRNA blastn 17122 220 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
12260277 12260277 PRJNA796753_P_NODE_44050_length_248_cov_0.880000_g43738_i0 PRJNA796753 44050 248 0.88 2.1824 Chlamydomonas sp. CCMP225 429245 Plants Plants 206 1.6299999999999998e-48   NTclustered gi|134142236|gb|EF432456.1| 429245 g43738 i0 86.559 86.741935483871 186 25 75 0 63 248 10 195 Chlamydomonas sp. CCMP225 clone B1 beta tubulin (btub) mRNA, partial cds blastn 21512 206 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. CCMP225
13534532 13534532 PRJNA796753_P_NODE_5811_length_561_cov_4.778689_g5503_i0 PRJNA796753 5811 561 4.778689 26.80844529 Monoraphidium neglectum 145388 Plants Plants 102 5.41e-17   NTclustered gi|926765541|ref|XM_014036369.1| 145388 g5503 i0 87.64 1.01247771836007 89 9 16 2 63 150 44 131 Monoraphidium neglectum 40S ribosomal protein S29 mRNA blastn 568 102 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
15245069 15245069 PRJNA796753_P_NODE_1512_length_1012_cov_4.648562_g1311_i0 PRJNA796753 1512 1012 4.648562 47.04344744 Chlorophyta 3041 Plants Plants 372 6.94e-98   NTclustered gi|2082260161|ref|XM_001690941.2| 3055 g1311 i0 83.929 29.6225296442688 392 59 39 4 43 432 160 549 Chlamydomonas reinhardtii ribosomal protein S23 (CHLRE_12g504200v5), mRNA blastn 29978 374 0.994652406417112 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
16083367 16083367 PRJNA796753_P_NODE_54653_length_241_cov_0.916667_g54341_i0 PRJNA796753 54653 241 0.916667 2.20916747 Chlamydomonas reinhardtii 3055 Plants Plants 182 2.65e-41   NTclustered gi|2082244625|ref|XM_001698617.2| 3055 g54341 i0 82.243 1.77593360995851 214 34 88 4 30 241 519 308 Chlamydomonas reinhardtii ribosomal protein S12 (CHLRE_04g214503v5), mRNA blastn 428 182 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
17359032 17359032 PRJNA796753_P_NODE_26114_length_294_cov_1.357466_g25802_i0 PRJNA796753 26114 294 1.357466 3.99095004 Chlorella variabilis 554065 Plants Plants 252 2.51e-62   NTclustered gi|552811023|ref|XM_005843291.1| 554065 g25802 i0 86.017 27.2448979591837 236 32 80 1 48 283 895 661 Chlorella variabilis S-adenosyl-L-homocysteine hydrolase (CHLNCDRAFT_37522) mRNA, complete cds blastn 8010 252 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
23733430 23733430 PRJNA796753_P_NODE_23639_length_308_cov_0.982979_g23327_i0 PRJNA796753 23639 308 0.982979 3.02757532 Monoraphidium neglectum 145388 Plants Plants 193 1.62e-44   NTclustered gi|926780633|ref|XM_014043337.1| 145388 g23327 i0 82.222 15.2564935064935 225 38 73 2 85 308 452 229 Monoraphidium neglectum 40S ribosomal protein S14-3 mRNA blastn 4699 193 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;