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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA796753" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 4 ✖

bioproject 1

  • PRJNA796753 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5884098 5884098 PRJNA796753_P_NODE_12245_length_400_cov_3.605505_g11933_i0 PRJNA796753 12245 400 3.605505 14.42202 Karpovia croatica 2925417 Root_unresolved Root_unresolved 104 1.04e-17   NTclustered gi|2206682173|gb|OM966646.1| 2925417 g11933 i0 87.912 15.85 91 7 22 4 16 104 6108 6020 Karpovia croatica strain CRO19P6 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 6340 104 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Karpovia Karpovia croatica
9708947 9708947 PRJNA796753_P_NODE_37028_length_256_cov_2.153005_g36716_i0 PRJNA796753 37028 256 2.153005 5.5116928 Thecamonas trahens 529818 Root_unresolved Root_unresolved 204 6.07e-48   NTclustered gi|923123918|ref|XM_013899974.1| 461836 g36716 i0 83.333 99.84375 222 35 86 2 15 235 1021 1241 Thecamonas trahens ATCC 50062 ABC transporter F family member 4 (AMSG_08355), mRNA blastn 25560 204 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
16083157 16083157 PRJNA796753_P_NODE_20513_length_326_cov_1.217391_g20201_i0 PRJNA796753 20513 326 1.217391 3.96869466 Thecamonas trahens 529818 Root_unresolved Root_unresolved 230 1.3199999999999998e-55   NTclustered gi|923133140|ref|XM_013904582.1| 461836 g20201 i0 79.811 8.04907975460123 317 62 97 2 1 316 48 363 Thecamonas trahens ATCC 50062 Ras-like protein rasG (AMSG_03185), partial mRNA blastn 2624 230 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
25007018 25007018 PRJNA796753_P_NODE_14480_length_373_cov_4.340000_g14168_i0 PRJNA796753 14480 373 4.34 16.1882 Thecamonas trahens 529818 Root_unresolved Root_unresolved 128 5.73e-25   NTclustered gi|923136453|ref|XM_013906238.1| 461836 g14168 i0 82.119 0.589812332439678 151 25 40 1 90 240 290 142 Thecamonas trahens ATCC 50062 50S ribosomal protein L36e (AMSG_01644), partial mRNA blastn 220 128 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;