RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA796639" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA796639 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2056436 2056436 PRJNA796639_P_NODE_5402_length_253_cov_8.455556_g5277_i0 PRJNA796639 5402 253 8.455556 21.39255668 Puccinia triticina 208348 Fungi Fungi 359 1.21e-94   NTclustered gi|1714236267|ref|NC_044103.1| 208348 g5277 i0 93.388 3.82608695652174 242 16 96 0 7 248 21543 21784 Puccinia triticina isolate HnZU18-3 mitochondrion, complete genome blastn 968 359 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Pucciniaceae Puccinia Puccinia triticina
2056453 2056453 PRJNA796639_P_NODE_6462_length_247_cov_0.885057_g6337_i0 PRJNA796639 6462 247 0.885057 2.18609079 Ganoderma boninense 34458 Fungi Fungi 187 5.87e-43   NTclustered gi|1768663045|emb|LR729612.1| 34458 g6337 i0 93.6 1.04048582995951 125 8 51 0 112 236 867 743 Ganoderma boninense A7U5U4 gene for Hsp70 blastn 257 187 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Ganoderma Ganoderma boninense
4608922 4608922 PRJNA796639_P_NODE_7964_length_204_cov_4.702290_g7839_i0 PRJNA796639 7964 204 4.70229 9.5926716 Puccinia triticina 208348 Fungi Fungi 274 3.49e-69   NTclustered gi|1714236267|ref|NC_044103.1| 208348 g7839 i0 91.5 4.84803921568627 200 15 98 2 1 200 45354 45157 Puccinia triticina isolate HnZU18-3 mitochondrion, complete genome blastn 989 274 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Pucciniaceae Puccinia Puccinia triticina
10984499 10984499 PRJNA796639_P_NODE_7209_length_244_cov_0.900585_g7084_i0 PRJNA796639 7209 244 0.900585 2.1974274 Ganoderma boninense 34458 Fungi Fungi 255 1.5600000000000001e-63   NTclustered gi|1768652417|emb|LR723976.1| 34458 g7084 i0 86.066 3.32377049180328 244 26 99 7 1 243 613 849 Ganoderma boninense Q52CS0 gene for Ubiquitin-like modifier-activating enzyme ATG7 (ATG12-activating enzyme E1 ATG7) (Autophagy-related protein 7) blastn 811 255 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Ganoderma Ganoderma boninense
12260038 12260038 PRJNA796639_P_NODE_5990_length_249_cov_0.875000_g5865_i0 PRJNA796639 5990 249 0.875 2.17875 Lentinus tigrinus 5365 Fungi Fungi 327 3.34e-85   NTclustered gi|2797368524|ref|XM_067678534.1| 1328758 g5865 i0 90.476 2.98393574297189 252 18 100 4 1 249 603 355 Lentinus tigrinus ALCF2SS1-7 uncharacterized protein (L226DRAFT_518000), partial mRNA blastn 743 327 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Lentinus Lentinus tigrinus
16083047 16083047 PRJNA796639_P_NODE_5213_length_258_cov_1.664865_g5088_i0 PRJNA796639 5213 258 1.664865 4.2953517 Puccinia triticina 208348 Fungi Fungi 178 3.71e-40   NTclustered gi|2436884909|ref|XM_053170626.1| 208348 g5088 i0 79.537 1.00387596899225 259 46 99 7 3 258 1515 1769 Puccinia triticina uncharacterized protein (PtA15_6A876), partial mRNA blastn 259 178 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Pucciniaceae Puccinia Puccinia triticina
19907328 19907328 PRJNA796639_P_NODE_5336_length_255_cov_1.692308_g5211_i0 PRJNA796639 5336 255 1.692308 4.3153854 Austropuccinia psidii 181123 Fungi Fungi 185 2.19e-42   NTclustered gi|1714236393|ref|NC_044121.1| 181123 g5211 i0 92.424 2.96078431372549 132 7 51 3 123 252 30143 30273 Austropuccinia psidii isolate MF-1 mitochondrion, complete genome blastn 755 185 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Sphaerophragmiaceae Austropuccinia Austropuccinia psidii
21182991 21182991 PRJNA796639_P_NODE_5057_length_262_cov_2.444444_g4932_i0 PRJNA796639 5057 262 2.444444 6.40444328 Puccinia kuehnii 133750 Fungi Fungi 379 9.649999999999998e-101   NTclustered gi|290543698|gb|GU171452.1| 133750 g4932 i0 93.75 5.19847328244275 256 10 96 4 5 256 56 309 Puccinia kuehnii microsatellite Stv_Puk_164 sequence blastn 1362 379 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Pucciniaceae Puccinia Puccinia kuehnii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;