contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA796639" and tax_kingdom = "Bacillati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7158942 | 7158942 | PRJNA796639_P_NODE_6286_length_248_cov_0.880000_g6161_i0 | PRJNA796639 | 6286 | 248 | 0.88 | 2.1824 | Mycolicibacterium chitae | 1792 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|1806410789|dbj|AP022604.1| | 1792 | g6161 | i0 | 100 | 0.233870967741935 | 29 | 0 | 12 | 0 | 28 | 56 | 4866058 | 4866086 | Mycolicibacterium chitae JCM 12403 DNA, nearly complete genome | blastn | 58 | 54.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycolicibacterium | Mycolicibacterium chitae | ||
| 9708761 | 9708761 | PRJNA796639_P_NODE_6228_length_248_cov_0.880000_g6103_i0 | PRJNA796639 | 6228 | 248 | 0.88 | 2.1824 | uncultured Eubacteriales bacterium | 172733 | Bacteria | Bacteria | 340 | 4.27e-89 | NTclustered | gi|2729058706|emb|OZ007006.1| | 172733 | g6103 | i0 | 91.498 | 8.96774193548387 | 247 | 21 | 99 | 0 | 1 | 247 | 7078 | 7324 | MAG: uncultured Eubacteriales bacterium isolate metabat2_pooled_hifiasm.126 MAG genome assembly, chromosome: 1 | blastn | 2224 | 340 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | uncultured Eubacteriales bacterium | ||||
| 12260021 | 12260021 | PRJNA796639_P_NODE_4810_length_268_cov_1.579487_g4685_i0 | PRJNA796639 | 4810 | 268 | 1.579487 | 4.23302516 | Apilactobacillus apisilvae | 2923364 | Bacteria | Bacteria | 54.7 | 0.007 | NTclustered | gi|2239972674|gb|CP093362.1| | 2923364 | g4685 | i0 | 100 | 0.108208955223881 | 29 | 0 | 11 | 0 | 72 | 100 | 96647 | 96619 | Apilactobacillus apisilvae strain SG5_A10 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Apilactobacillus | Apilactobacillus apisilvae | ||
| 12260064 | 12260064 | PRJNA796639_P_NODE_7370_length_243_cov_0.905882_g7245_i0 | PRJNA796639 | 7370 | 243 | 0.905882 | 2.20129326 | Nocardioides sp. S5 | 2017486 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|1999037722|gb|CP022296.1| | 2017486 | g7245 | i0 | 100 | 230.102880658436 | 243 | 0 | 100 | 0 | 1 | 243 | 1843263 | 1843505 | Nocardioides sp. S5 chromosome, complete genome | blastn | 55915 | 449 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Nocardioides | Nocardioides sp. S5 | ||
| 12696259 | 12696259 | PRJNA796639_P_NODE_7830_length_241_cov_0.916667_g7705_i0 | PRJNA796639 | 7830 | 241 | 0.916667 | 2.20916747 | Peribacillus | 2675229 | Bacteria | Bacteria | 440 | 3.959999999999999e-119 | NTclustered | gi|1906925978|gb|CP050509.1| | 421767 | g7705 | i0 | 99.585 | 1139.9377593361 | 241 | 1 | 100 | 0 | 1 | 241 | 5138452 | 5138692 | Peribacillus butanolivorans strain KJ40 chromosome, complete genome | blastn | 274725 | 440 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Peribacillus | Peribacillus butanolivorans | ||
| 13534145 | 13534145 | PRJNA796639_P_NODE_3431_length_304_cov_1.129870_g3306_i0 | PRJNA796639 | 3431 | 304 | 1.12987 | 3.4348048 | Streptomyces sp. cg36 | 3238798 | Bacteria | Bacteria | 52.8 | 0.028 | NTclustered | gi|2784064359|gb|CP163520.1| | 3238798 | g3306 | i0 | 100 | 0.0921052631578947 | 28 | 0 | 9 | 0 | 254 | 281 | 995425 | 995398 | Streptomyces sp. cg36 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. cg36 | ||
| 14809083 | 14809083 | PRJNA796639_P_NODE_5632_length_251_cov_0.865169_g5507_i0 | PRJNA796639 | 5632 | 251 | 0.865169 | 2.17157419 | Crocosphaera subtropica | 2546360 | Bacteria | Bacteria | 52.8 | 0.023 | NTclustered | gi|171696371|gb|CP000806.1| | 43989 | g5507 | i0 | 100 | 0.111553784860558 | 28 | 0 | 11 | 0 | 24 | 51 | 2156137 | 2156164 | Cyanothece sp. ATCC 51142 circular chromosome, complete sequence | blastn | 28 | 52.8 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcales | Aphanothecaceae | Crocosphaera | Crocosphaera subtropica | |
| 16519500 | 16519500 | PRJNA796639_P_NODE_1313_length_491_cov_1.031100_g1188_i0 | PRJNA796639 | 1313 | 491 | 1.0311 | 5.062701 | Cutibacterium | 1912216 | Bacteria | Bacteria | 898 | 0 | NTclustered | gi|2548746222|gb|CP129004.1| | 1747 | g1188 | i0 | 99.594 | 270.720977596741 | 493 | 0 | 100 | 1 | 1 | 491 | 608443 | 608935 | Cutibacterium acnes strain EASDk81B chromosome, complete genome | blastn | 132924 | 898 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 19068301 | 19068301 | PRJNA796639_P_NODE_4275_length_280_cov_1.681159_g4150_i0 | PRJNA796639 | 4275 | 280 | 1.681159 | 4.7072452 | Nocardioides | 1839 | Bacteria | Bacteria | 501 | 2.13e-137 | NTclustered | gi|1605178659|gb|CP038267.1| | 2518370 | g4150 | i0 | 98.929 | 235.482142857143 | 280 | 3 | 100 | 0 | 1 | 280 | 573651 | 573372 | Nocardioides euryhalodurans strain MMS17-SY117 chromosome, complete genome | blastn | 65935 | 501 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Nocardioides | Nocardioides euryhalodurans | ||
| 24168233 | 24168233 | PRJNA796639_P_NODE_5659_length_251_cov_0.865169_g5534_i0 | PRJNA796639 | 5659 | 251 | 0.865169 | 2.17157419 | Lactiplantibacillus | 2767842 | Bacteria | Bacteria | 464 | 2.47e-126 | NTclustered | gi|2739944818|emb|OZ061355.1| | 1589 | g5534 | i0 | 100 | 480.358565737052 | 251 | 0 | 100 | 0 | 1 | 251 | 1279560 | 1279310 | Lactiplantibacillus pentosus isolate Lactiplantibacillus pentosus CNRZ1547 genome assembly, chromosome: 1 | blastn | 120570 | 464 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactiplantibacillus | Lactiplantibacillus pentosus | ||
| 25006969 | 25006969 | PRJNA796639_P_NODE_6600_length_247_cov_0.885057_g6475_i0 | PRJNA796639 | 6600 | 247 | 0.885057 | 2.18609079 | Enterococcus faecalis | 1351 | Bacteria | Bacteria | 457 | 4.05e-124 | NTclustered | gi|1963785894|emb|LR962464.1| | 1351 | g6475 | i0 | 100 | 100 | 247 | 0 | 100 | 0 | 1 | 247 | 2123226 | 2122980 | Enterococcus faecalis isolate 28157_4#317 genome assembly, chromosome: 1 | blastn | 24700 | 457 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus faecalis | ||
| 25443370 | 25443370 | PRJNA796639_P_NODE_1860_length_410_cov_2.323442_g1735_i0 | PRJNA796639 | 1860 | 410 | 2.323442 | 9.5261122 | Cutibacterium | 1912216 | Bacteria | Bacteria | 758 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g1735 | i0 | 100 | 250.648780487805 | 410 | 0 | 100 | 0 | 1 | 410 | 55374 | 55783 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 102766 | 758 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;